CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027536_P003	Maize	cytoskeleton, cytosol, peroxisome	96.18	96.18
HORVU4Hr1G081310.6	Barley	mitochondrion	77.65	81.73
Os03t0133900-01	Rice	cytosol	83.24	79.94
TraesCS4B01G330300.1	Wheat	cytosol	77.94	78.4
TraesCS5A01G501800.1	Wheat	cytosol	77.65	78.34
TraesCS4D01G327200.1	Wheat	cytosol	77.65	78.34
KRH76556	Soybean	cytosol	40.88	68.14
GSMUA_Achr5P19080_001	Banana	cytosol	67.35	67.55
VIT_04s0210g00190.t01	Wine grape	cytosol	61.18	62.84
Bra024500.1-P	Field mustard	cytosol, peroxisome, plastid	57.35	61.32
CDY07835	Canola	cytosol, peroxisome, plastid	57.35	60.56
AT2G17640.1	Thale cress	cytosol	57.06	60.06
CDY29188	Canola	cytosol, peroxisome, plastid	56.76	59.94
Solyc02g082850.2.1	Tomato	cytosol	61.76	58.99
PGSC0003DMT400003992	Potato	cytosol	61.47	58.38
KRH28896	Soybean	mitochondrion	61.76	58.17
KRH07931	Soybean	cytosol, mitochondrion	56.18	55.69
AT4G35640.1	Thale cress	cytosol	57.94	55.49
OQU87436	Sorghum	cytosol, mitochondrion, peroxisome, plastid	41.76	45.08
KRH69684	Soybean	mitochondrion	52.94	44.55
EES19864	Sorghum	cytosol	41.76	44.24
CDY26432	Canola	cytosol	20.0	43.59
KRH76559	Soybean	cytosol	17.94	42.96
EER92698	Sorghum	cytosol	38.24	41.8

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	EntrezGene:8085673
UniProt:C5WZ15	EnsemblPlants:EER92913	ProteinID:EER92913	ProteinID:EER92913.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019344	InterPro:Hexapep	InterPro:Hexapep_transf_CS	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441
ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF8	MetaCyc:PWY-6936	MetaCyc:PWY-7274	SMART:SM00971
EnsemblPlantsGene:SORBI_3001G514800	SUPFAM:SSF51161	unigene:Sbi.16802	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172
InterPro:Trimer_LpxA-like_sf	UniParc:UPI0001A82C95	RefSeq:XP_002465915.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:78190542..78199031

Molecular Weight (calculated)

36116.4 Da

IEP (calculated)

6.930

GRAVY (calculated)

0.035

Length

340 amino acids

Sequence
(BLAST)

001: MTSCGCLVLE KVEGDAAAKA RVKAAPGAGA GAGCGSCAGD WRGRSEAIFP IYVMGSSRGS TVAAARGIVD SPEDPIWVAV KAEAKSEAEK EPILSSFLYA
101: SVLSHDCLER ALSFVLANRL EDPTLLATQL IDIFNDVVLN NKDMCRSIRL DAQAFKDRDP ACSQYSWALL YLKGYQSLQS YRIANVLWNQ GRKVLALALQ
201: SRISEVFAVD IHPAAKIGEG ILLDHGTGLV IGETAVVGNW VSLMQGVTLG GTGKEHGDRH PKIGQGALIG AGATILGNIN VGEGAMIAAG SLVLKDVPPH
301: SMAVGNPAKI VGYTEKEDPS LTMKHDARRD YFEHAAVRFR

Best Arabidopsis Sequence Match ( AT4G35640.1 )
(BLAST)

001: MACINGENRD FSSSSSLSSL PMIVSRNFSA RDDGETGDEF PFERIFPVYA RGTLNPVADP VLLDFTNSSY DPIWDSIREE AKLEAEEEPV LSSFLYASIL
101: SHDCLEQALS FVLANRLQNP TLLATQLMDI FCNVMVHDRG IQSSIRLDVQ AFKDRDPACL SYSSAILHLK GYLALQAYRV AHKLWKQGRK LLALALQSRV
201: SEVFGIDIHP AARIGKGILL DHGTGVVIGE TAVIGDRVSI LHGVTLGGTG KETGDRHPNI GDGALLGACV TILGNIKIGA GAMVAAGSLV LKDVPSHSMV
301: AGNPAKLIGF VDEQDPSMTM EHDATREFFQ NVAVAYRETI PNGSSVSGSC RERRH

Arabidopsis Description

SAT4SERAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178USX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.