CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76556	Soybean	cytosol	39.1	29.9
CDY07835	Canola	cytosol, peroxisome, plastid	54.49	26.4
CDY29188	Canola	cytosol, peroxisome, plastid	54.49	26.4
AT2G17640.1	Thale cress	cytosol	54.49	26.32
CDY52913	Canola	cytosol	36.54	21.51
HORVU4Hr1G081310.6	Barley	mitochondrion	42.95	20.74
VIT_04s0210g00190.t01	Wine grape	cytosol	43.59	20.54
Zm00001d027536_P003	Maize	cytoskeleton, cytosol, peroxisome	43.59	20.0
EER92913	Sorghum	cytosol	43.59	20.0
TraesCS5A01G501800.1	Wheat	cytosol	42.95	19.88
TraesCS4D01G327200.1	Wheat	cytosol	42.95	19.88
TraesCS4B01G330300.1	Wheat	cytosol	42.95	19.82
Os03t0133900-01	Rice	cytosol	44.87	19.77
Solyc02g082850.2.1	Tomato	cytosol	44.87	19.66
PGSC0003DMT400003992	Potato	cytosol	44.87	19.55
GSMUA_Achr5P19080_001	Banana	cytosol	41.67	19.17
KRH28896	Soybean	mitochondrion	43.59	18.84
CDY53752	Canola	cytosol	37.18	18.83
CDY32882	Canola	cytoskeleton, cytosol, nucleus	37.18	18.83
CDY42400	Canola	cytosol	38.46	18.63
CDY10517	Canola	cytosol	38.46	18.58
CDY32760	Canola	cytosol	36.54	18.51
KRH07931	Soybean	cytosol, mitochondrion	40.38	18.37
CDY26079	Canola	cytosol	37.18	18.12
CDY08269	Canola	cytosol	36.54	18.1
CDY11904	Canola	cytosol	35.26	17.8
CDX84336	Canola	cytosol	35.9	17.78
CDX88588	Canola	cytosol	35.26	17.74
KRH69684	Soybean	mitochondrion	39.74	15.35
KRH76559	Soybean	cytosol	2.56	2.82

Protein Annotations

EnsemblPlants:CDY26432	EnsemblPlantsGene:GSBRNA2T00035224001	Gene3D:2.160.10.10	GO:A0A078GMJ5	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	InterPro:Hexapep	InterPro:Hexapep_transf_CS	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR42811	PANTHER:PTHR42811:SF8
PFAM:PF00132	ProteinID:CDY26432	ProteinID:CDY26432.1	ScanProsite:PS00101	SEG:seg	SUPFAM:SSF51161
UniParc:UPI0004EF05F0	UniProt:A0A078GMJ5	MapMan:4.1.4.2.1	:	:	:

Description

BnaC09g42360DBnaC09g42360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMJ5]

Coordinates

chrLK032190:+:127324..128642

Molecular Weight (calculated)

16957.8 Da

IEP (calculated)

8.484

GRAVY (calculated)

0.052

Length

156 amino acids

Sequence
(BLAST)

001: MEEPALVKLG YWFCGNERKR KVEVDERDEV GAFLDLSIGA RVKESRRCLS SKKKSRYGVG GTWKETGDRH PKIGEGALLG ACVTVLGNIS IGAGAMVAAG
101: SLVLKDVPPH SVVAGNPAKL IRVMDEQDPC LAMKYGEFVD SCILLVASFV FLKWIM

Best Arabidopsis Sequence Match ( AT2G17640.1 )
(BLAST)

001: MNGDELPFES GFEVYAKGTH KSEFDSNLLD PRSDPIWDAI REEAKLEAEK EPILSSFLYA GILAHDCLEQ ALGFVLANRL QNPTLLATQL LDIFYGVMMH
101: DKGIQSSIRH DLQAFKDRDP ACLSYSSAIL HLKGYHALQA YRVAHKLWNE GRKLLALALQ SRISEVFGID IHPAARIGEG ILLDHGTGVV IGETAVIGNG
201: VSILHGVTLG GTGKETGDRH PKIGEGALLG ACVTILGNIS IGAGAMVAAG SLVLKDVPSH SVVAGNPAKL IRVMEEQDPS LAMKHDATKE FFRHVADGYK
301: GAQSNGPSLS AGDTEKGHTN STS

Arabidopsis Description

SAT2Serine acetyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8S895]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.