CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28896	Soybean	mitochondrion	56.34	22.16
KRH07931	Soybean	cytosol, mitochondrion	51.41	21.28
Bra024500.1-P	Field mustard	cytosol, peroxisome, plastid	46.48	20.75
CDY07835	Canola	cytosol, peroxisome, plastid	46.48	20.5
CDY29188	Canola	cytosol, peroxisome, plastid	46.48	20.5
AT2G17640.1	Thale cress	cytosol	45.77	20.12
VIT_04s0210g00190.t01	Wine grape	cytosol	46.48	19.94
AT4G35640.1	Thale cress	cytosol	47.89	19.15
Solyc02g082850.2.1	Tomato	cytosol	47.89	19.1
PGSC0003DMT400003992	Potato	cytosol	47.89	18.99
HORVU4Hr1G081310.6	Barley	mitochondrion	42.96	18.89
Zm00001d027536_P003	Maize	cytoskeleton, cytosol, peroxisome	43.66	18.24
TraesCS4D01G327200.1	Wheat	cytosol	42.96	18.1
TraesCS5A01G501800.1	Wheat	cytosol	42.96	18.1
TraesCS4B01G330300.1	Wheat	cytosol	42.96	18.05
GSMUA_Achr5P19080_001	Banana	cytosol	42.96	17.99
EER92913	Sorghum	cytosol	42.96	17.94
Os03t0133900-01	Rice	cytosol	42.96	17.23
KRH69684	Soybean	mitochondrion	45.77	16.09
KRH73892	Soybean	mitochondrion	26.06	10.39
KRH06519	Soybean	cytosol, mitochondrion, nucleus	20.42	10.14
KRH47957	Soybean	cytosol, mitochondrion, nucleus	19.72	9.79
KRH14245	Soybean	mitochondrion	23.24	9.4
KRH46343	Soybean	mitochondrion	23.24	8.53
KRG98542	Soybean	mitochondrion	21.13	7.67
KRH05125	Soybean	mitochondrion	3.52	3.18
CDY26432	Canola	cytosol	2.82	2.56
KRH00049	Soybean	mitochondrion	2.82	2.34
KRH76556	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	MapMan:4.1.4.2.1	UniProt:A0A0R0LC31	EMBL:ACUP02000623
EnsemblPlantsGene:GLYMA_01G1600001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	ProteinID:KRH76558.1	EnsemblPlants:KRH76559	ProteinID:KRH76559	ProteinID:KRH76559.1
PFAM:PF06426	PANTHER:PTHR42811	PANTHER:PTHR42811:SF8	MetaCyc:PWY-6936	MetaCyc:PWY-7274	SMART:SM00971
InterPro:Ser_AcTrfase_N	UniParc:UPI0006EDE3C8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:49858435..49859233

Molecular Weight (calculated)

16259.7 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.095

Length

142 amino acids

Sequence
(BLAST)

001: MACLSRHHHH HRSWLTSPDD MLQRCPLSAH HHRLRDDDAE PIYLPSLSSA YRIFPVYAMG APDPIWKAVR DEAKLEAEKE PILSSFLYAS ILAHDCLEQA
101: LAFVVANRLQ NPTLLATQLM DIFCLVILHD KAIQRSIRLD VQ

Best Arabidopsis Sequence Match ( AT4G35640.1 )
(BLAST)

001: MACINGENRD FSSSSSLSSL PMIVSRNFSA RDDGETGDEF PFERIFPVYA RGTLNPVADP VLLDFTNSSY DPIWDSIREE AKLEAEEEPV LSSFLYASIL
101: SHDCLEQALS FVLANRLQNP TLLATQLMDI FCNVMVHDRG IQSSIRLDVQ AFKDRDPACL SYSSAILHLK GYLALQAYRV AHKLWKQGRK LLALALQSRV
201: SEVFGIDIHP AARIGKGILL DHGTGVVIGE TAVIGDRVSI LHGVTLGGTG KETGDRHPNI GDGALLGACV TILGNIKIGA GAMVAAGSLV LKDVPSHSMV
301: AGNPAKLIGF VDEQDPSMTM EHDATREFFQ NVAVAYRETI PNGSSVSGSC RERRH

Arabidopsis Description

SAT4SERAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178USX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.