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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 2
  • plastid 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G17640.1 Thale cress cytosol 68.73 75.54
KRH76556 Soybean cytosol 38.59 67.16
VIT_04s0210g00190.t01 Wine grape cytosol 58.59 62.84
PGSC0003DMT400003992 Potato cytosol 62.54 62.01
Solyc02g082850.2.1 Tomato cytosol 61.97 61.8
KRH28896 Soybean mitochondrion 62.54 61.5
HORVU4Hr1G081310.6 Barley mitochondrion 55.49 60.99
GSMUA_Achr5P19080_001 Banana cytosol 57.75 60.47
KRH07931 Soybean cytosol, mitochondrion 57.18 59.18
TraesCS4B01G330300.1 Wheat cytosol 55.77 58.58
TraesCS4D01G327200.1 Wheat cytosol 55.49 58.46
Zm00001d027536_P003 Maize cytoskeleton, cytosol, peroxisome 55.77 58.24
TraesCS5A01G501800.1 Wheat cytosol 55.21 58.16
EER92913 Sorghum cytosol 55.49 57.94
Os03t0133900-01 Rice cytosol 56.06 56.21
AT5G56760.1 Thale cress cytosol 42.25 48.08
KRH76559 Soybean cytosol 19.15 47.89
KRH69684 Soybean mitochondrion 53.8 47.28
AT1G55920.1 Thale cress cytosol 39.15 44.27
AT3G13110.1 Thale cress mitochondrion, plastid 39.44 35.81
Protein Annotations
KEGG:00270+2.3.1.30KEGG:00920+2.3.1.30Gene3D:1.10.3130.10Gene3D:2.160.10.10MapMan:4.1.4.2.1EntrezGene:829716
UniProt:A0A178USX0ProteinID:AAL37489.1ProteinID:AEE86543.1ArrayExpress:AT4G35640EnsemblPlantsGene:AT4G35640RefSeq:AT4G35640
TAIR:AT4G35640RefSeq:AT4G35640-TAIR-GEnsemblPlants:AT4G35640.1TAIR:AT4G35640.1Symbol:ATSERAT3;2Unigene:At.71197
EMBL:BT004080EMBL:BT005047ProteinID:CAA20034.1ProteinID:CAB80280.1GO:GO:0000103GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006535GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009001GO:GO:0009058
GO:GO:0009987GO:GO:0016740GO:GO:0016746GO:GO:0019344InterPro:HexapepInterPro:Hexapep_transf_CS
RefSeq:NP_195289.3ProteinID:OAO96580.1PFAM:PF00132PFAM:PF06426PO:PO:0000293PO:PO:0003011
ScanProsite:PS00101PANTHER:PTHR42811PANTHER:PTHR42811:SF8UniProt:Q8W2B8SMART:SM00971SUPFAM:SSF51161
InterPro:Ser_AcTrfase_NInterPro:Ser_O-AcTrfaseTIGRFAMs:TIGR01172InterPro:Trimer_LpxA-like_sfUniParc:UPI000000C26CSEG:seg
Description
SAT4SERAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178USX0]
Coordinates
chr4:-:16905579..16908357
Molecular Weight (calculated)
38425.9 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.008
Length
355 amino acids
Sequence
(BLAST)
001: MACINGENRD FSSSSSLSSL PMIVSRNFSA RDDGETGDEF PFERIFPVYA RGTLNPVADP VLLDFTNSSY DPIWDSIREE AKLEAEEEPV LSSFLYASIL
101: SHDCLEQALS FVLANRLQNP TLLATQLMDI FCNVMVHDRG IQSSIRLDVQ AFKDRDPACL SYSSAILHLK GYLALQAYRV AHKLWKQGRK LLALALQSRV
201: SEVFGIDIHP AARIGKGILL DHGTGVVIGE TAVIGDRVSI LHGVTLGGTG KETGDRHPNI GDGALLGACV TILGNIKIGA GAMVAAGSLV LKDVPSHSMV
301: AGNPAKLIGF VDEQDPSMTM EHDATREFFQ NVAVAYRETI PNGSSVSGSC RERRH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.