Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52913 | Canola | cytosol | 78.73 | 93.58 |
| CDY53752 | Canola | cytosol | 86.98 | 88.96 |
| CDY42400 | Canola | cytosol | 84.13 | 82.3 |
| CDY08269 | Canola | cytosol | 80.63 | 80.63 |
| CDY10517 | Canola | cytosol | 81.9 | 79.88 |
| CDY26079 | Canola | cytosol | 80.0 | 78.75 |
| AT1G55920.1 | Thale cress | cytosol | 77.46 | 77.71 |
| PGSC0003DMT400057095 | Potato | cytosol | 66.98 | 63.75 |
| Solyc07g065340.1.1 | Tomato | cytosol | 66.67 | 63.44 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 31.75 | 60.98 |
| KRH00049 | Soybean | mitochondrion | 31.75 | 58.48 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 68.57 | 57.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.86 | 55.1 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 53.33 | 54.9 |
| KRH05125 | Soybean | mitochondrion | 26.67 | 53.5 |
| KRH46343 | Soybean | mitochondrion | 65.08 | 52.97 |
| KRG98542 | Soybean | mitochondrion | 65.71 | 52.94 |
| Solyc10g006040.1.1 | Tomato | extracellular | 61.27 | 52.88 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 52.7 | 52.87 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 51.43 | 52.43 |
| CDY11904 | Canola | cytosol | 51.43 | 52.43 |
| CDX88588 | Canola | cytosol | 51.43 | 52.26 |
| KRH73892 | Soybean | mitochondrion | 59.05 | 52.25 |
| PGSC0003DMT400037270 | Potato | plastid | 60.32 | 52.05 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 50.79 | 51.95 |
| CDY32760 | Canola | cytosol | 50.48 | 51.62 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 51.43 | 51.59 |
| KRH14245 | Soybean | mitochondrion | 57.46 | 51.57 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 50.79 | 50.96 |
| Zm00001d028154_P001 | Maize | cytosol | 50.16 | 50.32 |
| EER92698 | Sorghum | cytosol | 48.57 | 49.2 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 47.94 | 47.94 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 44.13 | 46.18 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 41.27 | 40.37 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 41.27 | 40.37 |
| CDY26432 | Canola | cytosol | 17.78 | 35.9 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078D4R8 |
| EnsemblPlants:CDX84336 | ProteinID:CDX84336 | ProteinID:CDX84336.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00141452001 | InterPro:Hexapep |
| InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 | PANTHER:PTHR42811 |
| PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 | InterPro:Ser_AcTrfase_N |
| InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EE8FB0 | SEG:seg |
Description
BnaC04g10980D
Coordinates
chrLK031836:-:1876668..1877785
Molecular Weight (calculated)
34123.7 Da
IEP (calculated)
6.094
GRAVY (calculated)
-0.093
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPCIYTSNT HLSQDDNSRF RYMNLFPDRI SRAPFTKTSN SLDGDDEDVW IKMVEEAQSD VEQEPILSSY YYSSVTSHRS LDTALANILS VKLSTLTLPS
101: STLFEVFTSV LQESPEIIGS AKQDLLAAKE RDPACLSYVQ CFLSFKGFLA CQAHRIAHKL WTQDRKILAL LIQNRVSEAY AVDIHPGAKI GRGVLLDHAT
201: GVVIGETAVV GDNVSILHDV TLGGTGKQCG DRHPKIGDGV LIGAGSCILG NITIGEGAKV GSGSVVLKDV PPRTTAVGNP ARLIGGKENP KRVDKIPGLT
301: MDQTSYLTEW SDYVI
101: STLFEVFTSV LQESPEIIGS AKQDLLAAKE RDPACLSYVQ CFLSFKGFLA CQAHRIAHKL WTQDRKILAL LIQNRVSEAY AVDIHPGAKI GRGVLLDHAT
201: GVVIGETAVV GDNVSILHDV TLGGTGKQCG DRHPKIGDGV LIGAGSCILG NITIGEGAKV GSGSVVLKDV PPRTTAVGNP ARLIGGKENP KRVDKIPGLT
301: MDQTSYLTEW SDYVI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.