Factsheet for PGSC0003DMT400057095

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037270
PGSC0003DMT400057095
PGSC0003DMT400059624

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	PGSC0003DMT400037270	AT1G55920.1	9076992
AT1G55920.1	PGSC0003DMT400057095	AT1G55920.1	9076992
AT3G13110.1	PGSC0003DMT400037270	AT3G13110.1	11168407
AT3G13110.1	PGSC0003DMT400057095	AT3G13110.1	11168407
AT3G13110.1	PGSC0003DMT400059624	AT3G59760.1	11168407
AT3G13110.1	PGSC0003DMT400059624	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065340.1.1	Tomato	cytosol	98.19	98.19
CDY52913	Canola	cytosol	59.21	73.96
AT1G55920.1	Thale cress	cytosol	65.26	68.79
CDY08269	Canola	cytosol	64.95	68.25
Bra038031.1-P	Field mustard	cytosol	61.03	68.24
CDY53752	Canola	cytosol	63.44	68.18
Bra037094.1-P	Field mustard	cytosol	64.35	67.62
PGSC0003DMT400037270	Potato	plastid	74.02	67.12
CDX84336	Canola	cytosol	63.75	66.98
CDY26079	Canola	cytosol	64.65	66.88
CDY10517	Canola	cytosol	64.95	66.56
Bra030821.1-P	Field mustard	cytosol	64.35	66.15
CDY42400	Canola	cytosol	63.75	65.53
KRH00049	Soybean	mitochondrion	33.23	64.33
VIT_19s0015g00130.t01	Wine grape	mitochondrion	72.81	63.93
KRH05125	Soybean	mitochondrion	29.61	62.42
KRH46343	Soybean	mitochondrion	70.69	60.47
GSMUA_Achr6P24840_001	Banana	cytosol	29.91	60.37
KRG98542	Soybean	mitochondrion	71.0	60.1
PGSC0003DMT400000764	Potato	cytosol	53.17	60.07
AT3G13110.1	Thale cress	mitochondrion, plastid	67.67	57.29
GSMUA_AchrUn_...	Banana	cytosol	42.3	57.14
TraesCS4B01G263300.1	Wheat	mitochondrion	52.27	55.99
Bra034705.1-P	Field mustard	plastid	66.47	55.98
KRH73892	Soybean	mitochondrion	60.12	55.9
KRH14245	Soybean	mitochondrion	58.61	55.27
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	51.66	54.46
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	51.36	54.14
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	51.36	54.14
EER92698	Sorghum	cytosol	49.55	52.73
Zm00001d028154_P001	Maize	cytosol	49.24	51.91
Os03t0196600-01	Rice	cytosol, plasma membrane	48.34	50.79
Os03t0185000-00	Rice	cytosol, plasma membrane	45.62	50.17
PGSC0003DMT400003992	Potato	cytosol	43.5	40.22

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
InterPro:Hexapep	InterPro:Hexapep_transf_CS	UniProt:M1C0E0	PFAM:PF00132	PFAM:PF06426	EnsemblPlantsGene:PGSC0003DMG400022181
PGSC:PGSC0003DMG400022181	EnsemblPlants:PGSC0003DMT400057095	PIRSF:PIRSF000441	ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF2
SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf
UniParc:UPI000295E5BE	:	:	:	:	:

Description

Serine acetyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400022181]

Coordinates

chr7:-:55381975..55383640

Molecular Weight (calculated)

36075.7 Da

IEP (calculated)

8.563

GRAVY (calculated)

-0.148

Length

331 amino acids

Sequence
(BLAST)

001: MAACIHASRT KNPQKNPLIR DPNKPQIDNH VYNYVKYCRP TFPDLASCKP ISEKSSKIEE LGDELWLKMK EEARSDIDQE PILSSYYVSS ILAHESMERA
101: LANHLSMKLG NPNLPSTTLF DLFVGVLTEE TDIIKSVKAD LRAVKERDPA CISYVHCFLN FKGFLACQAH RIAHKLWSKG RQILALLIQN RVSEVFAVDI
201: HPGAKIGKGI LLDHATGVVV GETAVIGNNV SILHNVTLGG TGKACGDRHP KIGDGVLIGA GTCVLGNVRI GDGAKIGAGS VVLKEVPART TAVGNPARLL
301: GGKENPKRLD KIPSFTMDHT SHMSEWSDYV I

Best Arabidopsis Sequence Match ( AT3G13110.1 )
(BLAST)

001: MLPVTSRRHF TMSLYMLRSS SPHINHHSFL LPSFVSSKFK HHTLSPPPSP PPPPPMAACI DTCRTGKPQI SPRDSSKHHD DESGFRYMNY FRYPDRSSFN
101: GTQTKTLHTR PLLEDLDRDA EVDDVWAKIR EEAKSDIAKE PIVSAYYHAS IVSQRSLEAA LANTLSVKLS NLNLPSNTLF DLFSGVLQGN PDIVESVKLD
201: LLAVKERDPA CISYVHCFLH FKGFLACQAH RIAHELWTQD RKILALLIQN RVSEAFAVDF HPGAKIGTGI LLDHATAIVI GETAVVGNNV SILHNVTLGG
301: TGKQCGDRHP KIGDGVLIGA GTCILGNITI GEGAKIGAGS VVLKDVPPRT TAVGNPARLL GGKDNPKTHD KIPGLTMDQT SHISEWSDYV I

Arabidopsis Description

SAT3Serine acetyltransferase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39218]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.