Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08269 | Canola | cytosol | 91.25 | 92.7 |
| CDY52913 | Canola | cytosol | 72.5 | 87.55 |
| CDY42400 | Canola | cytosol | 83.44 | 82.92 |
| CDY10517 | Canola | cytosol | 83.12 | 82.35 |
| CDY53752 | Canola | cytosol | 78.75 | 81.82 |
| CDX84336 | Canola | cytosol | 78.75 | 80.0 |
| AT1G55920.1 | Thale cress | cytosol | 78.12 | 79.62 |
| PGSC0003DMT400057095 | Potato | cytosol | 66.88 | 64.65 |
| Solyc07g065340.1.1 | Tomato | cytosol | 66.56 | 64.35 |
| GSMUA_Achr6P24840_001 | Banana | cytosol | 31.56 | 61.59 |
| KRH00049 | Soybean | mitochondrion | 30.94 | 57.89 |
| VIT_19s0015g00130.t01 | Wine grape | mitochondrion | 67.5 | 57.29 |
| VIT_00s0194g00120.t01 | Wine grape | plastid | 52.81 | 55.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.19 | 55.1 |
| Solyc10g006040.1.1 | Tomato | extracellular | 62.5 | 54.79 |
| KRG98542 | Soybean | mitochondrion | 65.62 | 53.71 |
| PGSC0003DMT400037270 | Potato | plastid | 61.25 | 53.7 |
| KRH05125 | Soybean | mitochondrion | 26.25 | 53.5 |
| KRH46343 | Soybean | mitochondrion | 64.38 | 53.23 |
| TraesCS4B01G263300.1 | Wheat | mitochondrion | 50.94 | 52.75 |
| KRH73892 | Soybean | mitochondrion | 57.81 | 51.97 |
| CDX88588 | Canola | cytosol | 50.31 | 51.94 |
| HORVU4Hr1G071040.1 | Barley | cytosol, mitochondrion | 50.94 | 51.91 |
| CDY11904 | Canola | cytosol | 50.0 | 51.78 |
| KRH14245 | Soybean | mitochondrion | 56.25 | 51.28 |
| TraesCS4A01G042700.1 | Wheat | cytosol, mitochondrion | 50.31 | 51.27 |
| TraesCS4D01G263500.1 | Wheat | cytosol, mitochondrion | 50.31 | 51.27 |
| CDY32882 | Canola | cytoskeleton, cytosol, nucleus | 49.06 | 50.97 |
| Os03t0196600-01 | Rice | cytosol, plasma membrane | 49.69 | 50.48 |
| CDY32760 | Canola | cytosol | 48.44 | 50.32 |
| Zm00001d028154_P001 | Maize | cytosol | 48.44 | 49.36 |
| EER92698 | Sorghum | cytosol | 47.19 | 48.55 |
| Os03t0185000-00 | Rice | cytosol, plasma membrane | 45.62 | 48.51 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 41.25 | 40.99 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 41.25 | 40.99 |
| CDY26432 | Canola | cytosol | 18.12 | 37.18 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078GLI0 |
| UniProt:A0A078GLI0 | EnsemblPlants:CDY26079 | ProteinID:CDY26079 | ProteinID:CDY26079.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00034695001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF2 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0004EF27D5 |
Description
BnaC06g11170DBnaC06g11170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLI0]
Coordinates
chrLK032185:-:74317..75476
Molecular Weight (calculated)
34664.8 Da
IEP (calculated)
6.278
GRAVY (calculated)
0.062
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPCIDTFRT CKLQVCHEDD SRFCYMNLFR PVQFPSRAPI TTTCHSNSLD GGDVWLKMLE EAKSDVEQEP VLSSYYHASI TSHPSLGSAL ANILSVKLST
101: LTLPSNTLFE MFISVLEESP EIVESVKQDL LAAKERDPAC LSYVHCFLSF KGFLACQAHR IAHELWSQDR RILALLIQNR VSEAFAVDIH PGAKIGKGIL
201: LDHATAVVIG ETAVVGDNVS ILHGVTLGGT GKQCGDRHPK IGDGVLIGAG TCILGNITIG EGAKIGSESV VLKDVPPRTT AVGNPARLIG GKENPKMIYK
301: VPGLSMDQTS YLTEWSDYVI
101: LTLPSNTLFE MFISVLEESP EIVESVKQDL LAAKERDPAC LSYVHCFLSF KGFLACQAHR IAHELWSQDR RILALLIQNR VSEAFAVDIH PGAKIGKGIL
201: LDHATAVVIG ETAVVGDNVS ILHGVTLGGT GKQCGDRHPK IGDGVLIGAG TCILGNITIG EGAKIGSESV VLKDVPPRTT AVGNPARLIG GKENPKMIYK
301: VPGLSMDQTS YLTEWSDYVI
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
Arabidopsis Description
SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.