Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002793.1-P | Field mustard | cytosol | 98.05 | 98.05 |
| CDY32760 | Canola | cytosol | 97.4 | 97.4 |
| AT5G56760.1 | Thale cress | cytosol | 89.29 | 88.14 |
| CDY11904 | Canola | cytosol | 85.06 | 84.79 |
| CDX88588 | Canola | cytosol | 85.06 | 84.52 |
| KRH06519 | Soybean | cytosol, mitochondrion, nucleus | 74.68 | 80.42 |
| Solyc12g008780.1.1 | Tomato | cytosol | 75.97 | 79.86 |
| KRH47957 | Soybean | cytosol, mitochondrion, nucleus | 74.03 | 79.72 |
| PGSC0003DMT400000764 | Potato | cytosol | 75.65 | 79.52 |
| VIT_11s0016g02450.t01 | Wine grape | cytosol | 73.7 | 78.28 |
| GSMUA_Achr8P27570_001 | Banana | plastid | 60.06 | 70.61 |
| Os05t0533500-01 | Rice | cytosol | 71.1 | 69.75 |
| GSMUA_Achr2P09310_001 | Banana | cytosol, peroxisome, plastid | 68.83 | 69.51 |
| TraesCS1A01G353800.1 | Wheat | cytosol | 70.45 | 69.33 |
| TraesCS3B01G321600.1 | Wheat | cytosol | 67.53 | 68.65 |
| HORVU0Hr1G022440.1 | Barley | mitochondrion | 67.53 | 68.65 |
| EES19864 | Sorghum | cytosol | 71.43 | 68.54 |
| TraesCS3A01G287400.1 | Wheat | mitochondrion | 67.21 | 68.32 |
| TraesCS3D01G286900.1 | Wheat | mitochondrion | 67.21 | 68.32 |
| TraesCS1D01G356800.1 | Wheat | cytosol | 69.81 | 68.25 |
| OQU87436 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 68.51 | 66.98 |
| Zm00001d011735_P001 | Maize | cytosol, mitochondrion | 67.21 | 66.77 |
| Zm00001d038737_P001 | Maize | extracellular | 70.45 | 61.82 |
| CDY52913 | Canola | cytosol | 51.3 | 59.62 |
| GSMUA_Achr4P01080_001 | Banana | cytosol | 38.64 | 58.05 |
| HORVU0Hr1G035820.1 | Barley | plastid | 67.86 | 52.64 |
| CDY08269 | Canola | cytosol | 51.95 | 50.79 |
| CDX84336 | Canola | cytosol | 51.95 | 50.79 |
| CDY53752 | Canola | cytosol | 50.65 | 50.65 |
| CDY42400 | Canola | cytosol | 52.27 | 50.0 |
| CDY10517 | Canola | cytosol | 51.95 | 49.54 |
| CDY26079 | Canola | cytosol | 50.97 | 49.06 |
| CDY29188 | Canola | cytosol, peroxisome, plastid | 45.78 | 43.79 |
| CDY07835 | Canola | cytosol, peroxisome, plastid | 45.45 | 43.48 |
| CDY26432 | Canola | cytosol | 18.83 | 37.18 |
Protein Annotations
| KEGG:00270+2.3.1.30 | KEGG:00920+2.3.1.30 | Gene3D:1.10.3130.10 | Gene3D:2.160.10.10 | MapMan:4.1.4.2.1 | GO:A0A078H609 |
| UniProt:A0A078H609 | EnsemblPlants:CDY32882 | ProteinID:CDY32882 | ProteinID:CDY32882.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009001 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00053012001 |
| InterPro:Hexapep | InterPro:Hexapep_transf_CS | PFAM:PF00132 | PFAM:PF06426 | PIRSF:PIRSF000441 | ScanProsite:PS00101 |
| PANTHER:PTHR42811 | PANTHER:PTHR42811:SF9 | MetaCyc:PWY-6936 | MetaCyc:PWY-7274 | SMART:SM00971 | SUPFAM:SSF51161 |
| InterPro:Ser_AcTrfase_N | InterPro:Ser_O-AcTrfase | TIGRFAMs:TIGR01172 | InterPro:Trimer_LpxA-like_sf | UniPathway:UPA00136 | UniParc:UPI0001BA7604 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g33290DBnaC09g33290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H609]
Coordinates
chrLK032301:-:191715..192730
Molecular Weight (calculated)
32457.5 Da
IEP (calculated)
6.386
GRAVY (calculated)
0.000
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAGELQHS PGNQSNDTQP SESEATAEIF AAAADAEAAG LWTQIKAEAR HDAEEEPALA SYLFSTILSH SSLERSISFH LGNKLCSSTL LSTLLYDLFL
101: NTFTSDPSLQ NATVADLRAA RVRDPACISF SQCLLNYKGF LAIQAHRVSH KLWTQSRKPL ALALHSRVSD VFAVDIHPAA KIGKGILLDH ATGVVIGETA
201: VIGNNVSILH HVTLGGTGKA CGDRHPKIGD GCLIGAGATI LGNVKIGAGA KVGAGSVVLI DVPPRATAVG NPARLVGGKE KPTMHDEECP GESMDHTSFI
301: SEWSDYII
101: NTFTSDPSLQ NATVADLRAA RVRDPACISF SQCLLNYKGF LAIQAHRVSH KLWTQSRKPL ALALHSRVSD VFAVDIHPAA KIGKGILLDH ATGVVIGETA
201: VIGNNVSILH HVTLGGTGKA CGDRHPKIGD GCLIGAGATI LGNVKIGAGA KVGAGSVVLI DVPPRATAVG NPARLVGGKE KPTMHDEECP GESMDHTSFI
301: SEWSDYII
001: MPPAGELRHQ SPSKEKLSSV TQSDEAEAAS AAISAAAADA EAAGLWTQIK AEARRDAEAE PALASYLYST ILSHSSLERS ISFHLGNKLC SSTLLSTLLY
101: DLFLNTFSSD PSLRNATVAD LRAARVRDPA CISFSHCLLN YKGFLAIQAH RVSHKLWTQS RKPLALALHS RISDVFAVDI HPAAKIGKGI LLDHATGVVV
201: GETAVIGNNV SILHHVTLGG TGKACGDRHP KIGDGCLIGA GATILGNVKI GAGAKVGAGS VVLIDVPCRG TAVGNPARLV GGKEKPTIHD EECPGESMDH
301: TSFISEWSDY II
101: DLFLNTFSSD PSLRNATVAD LRAARVRDPA CISFSHCLLN YKGFLAIQAH RVSHKLWTQS RKPLALALHS RISDVFAVDI HPAAKIGKGI LLDHATGVVV
201: GETAVIGNNV SILHHVTLGG TGKACGDRHP KIGDGCLIGA GATILGNVKI GAGAKVGAGS VVLIDVPCRG TAVGNPARLV GGKEKPTIHD EECPGESMDH
301: TSFISEWSDY II
Arabidopsis Description
SAT5Serine acetyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q42538]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.