Factsheet for Solyc12g008780.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000764	Potato	cytosol	99.32	99.32
KRH06519	Soybean	cytosol, mitochondrion, nucleus	84.64	86.71
KRH47957	Soybean	cytosol, mitochondrion, nucleus	82.94	84.97
VIT_11s0016g02450.t01	Wine grape	cytosol	83.28	84.14
AT5G56760.1	Thale cress	cytosol	82.25	77.24
Bra006857.1-P	Field mustard	cytosol	81.23	77.02
CDY11904	Canola	cytosol	81.23	77.02
CDX88588	Canola	cytosol	81.23	76.77
Bra002793.1-P	Field mustard	cytosol	80.2	76.3
CDY32882	Canola	cytoskeleton, cytosol, nucleus	79.86	75.97
CDY32760	Canola	cytosol	79.52	75.65
GSMUA_Achr2P09310_001	Banana	cytosol, peroxisome, plastid	78.5	75.41
GSMUA_Achr8P27570_001	Banana	plastid	65.87	73.66
HORVU0Hr1G022440.1	Barley	mitochondrion	74.74	72.28
TraesCS3B01G321600.1	Wheat	cytosol	74.74	72.28
TraesCS3A01G287400.1	Wheat	mitochondrion	74.4	71.95
TraesCS3D01G286900.1	Wheat	mitochondrion	74.06	71.62
TraesCS1A01G353800.1	Wheat	cytosol	75.43	70.61
TraesCS1D01G356800.1	Wheat	cytosol	75.43	70.16
Os05t0533500-01	Rice	cytosol	74.4	69.43
EES19864	Sorghum	cytosol	75.43	68.85
Zm00001d011735_P001	Maize	cytosol, mitochondrion	72.7	68.71
OQU87436	Sorghum	cytosol, mitochondrion, peroxisome, plastid	73.38	68.25
Zm00001d038737_P001	Maize	extracellular	74.4	62.11
GSMUA_Achr4P01080_001	Banana	cytosol	42.32	60.49
HORVU0Hr1G035820.1	Barley	plastid	75.09	55.42
Solyc07g065340.1.1	Tomato	cytosol	60.41	53.47
Solyc10g006040.1.1	Tomato	extracellular	55.97	44.93
Solyc02g082850.2.1	Tomato	cytosol	48.12	39.61

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0019344	InterPro:Hexapep	InterPro:Hexapep_transf_CS	UniProt:K4DBW6	PFAM:PF00132
PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF9	SMART:SM00971
SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	EnsemblPlantsGene:Solyc12g008780.1	EnsemblPlants:Solyc12g008780.1.1	TIGRFAMs:TIGR01172
InterPro:Trimer_LpxA-like_sf	UniParc:UPI00027696CD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:-:2127063..2129694

Molecular Weight (calculated)

31242.2 Da

IEP (calculated)

6.882

GRAVY (calculated)

-0.028

Length

293 amino acids

Sequence
(BLAST)

001: MPAEEHRNAS PAAPHPPTDT AEEAIWLWTQ IKAEARRDAE AEPALASYLY STILSHSSLE RSLSFHLGNK LCSSTLLSTL LYDLFLNNFS SDPDLRAAAS
101: ADLLAARYRD PACVSFSHCL LNYKGFLACQ AHRVAHKLWT QSRRPLALAL QSRISDVFAV DIHPAAKIGK GILFDHATGV VVGETAVIGN NVSILHHVTL
201: GGTGKFGGDR HPKIGDGVLI GAGATILGNI NIGEGAKIGA GSVVLIDVPP RTTAVGNPAR LVGGKEQPTK HEECPGESMD HTSFISGWSD YII

Best Arabidopsis Sequence Match ( AT5G56760.1 )
(BLAST)

001: MPPAGELRHQ SPSKEKLSSV TQSDEAEAAS AAISAAAADA EAAGLWTQIK AEARRDAEAE PALASYLYST ILSHSSLERS ISFHLGNKLC SSTLLSTLLY
101: DLFLNTFSSD PSLRNATVAD LRAARVRDPA CISFSHCLLN YKGFLAIQAH RVSHKLWTQS RKPLALALHS RISDVFAVDI HPAAKIGKGI LLDHATGVVV
201: GETAVIGNNV SILHHVTLGG TGKACGDRHP KIGDGCLIGA GATILGNVKI GAGAKVGAGS VVLIDVPCRG TAVGNPARLV GGKEKPTIHD EECPGESMDH
301: TSFISEWSDY II

Arabidopsis Description

SAT5Serine acetyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q42538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.