Factsheet for GSMUA_AchrUn_randomP02510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P17120_001
GSMUA_Achr6P24840_001
GSMUA_Achr9P02430_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	GSMUA_Achr6P24840_001	AT1G55920.1	9076992
AT1G55920.1	GSMUA_AchrUn_...	AT1G55920.1	9076992
AT3G13110.1	GSMUA_Achr6P24840_001	AT3G13110.1	11168407
AT3G13110.1	GSMUA_AchrUn_...	AT3G13110.1	11168407
AT3G13110.1	GSMUA_Achr5P17120_001	AT3G59760.1	11168407
AT3G13110.1	GSMUA_Achr9P02430_001	AT3G59760.1	11168407
AT3G13110.1	GSMUA_Achr5P17120_001	AT3G59760.1	12063244
AT3G13110.1	GSMUA_Achr9P02430_001	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24840_001	Banana	cytosol	50.2	75.0
GSMUA_Achr4P01080_001	Banana	cytosol	42.45	50.73
CDY52913	Canola	cytosol	53.47	49.43
KRH00049	Soybean	mitochondrion	33.88	48.54
GSMUA_Achr8P27570_001	Banana	plastid	51.02	47.71
KRH05125	Soybean	mitochondrion	30.2	47.13
Bra038031.1-P	Field mustard	cytosol	55.92	46.28
TraesCS4B01G263300.1	Wheat	mitochondrion	54.69	43.37
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	55.1	42.99
CDX84336	Canola	cytosol	55.1	42.86
EER92698	Sorghum	cytosol	54.29	42.77
AT1G55920.1	Thale cress	cytosol	54.69	42.68
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	54.69	42.68
CDY53752	Canola	cytosol	53.47	42.53
PGSC0003DMT400057095	Potato	cytosol	57.14	42.3
Solyc07g065340.1.1	Tomato	cytosol	57.14	42.3
CDY08269	Canola	cytosol	54.29	42.22
CDY26079	Canola	cytosol	55.1	42.19
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	53.88	42.04
Zm00001d028154_P001	Maize	cytosol	53.88	42.04
CDY42400	Canola	cytosol	55.1	41.93
Bra030821.1-P	Field mustard	cytosol	55.1	41.93
Bra037094.1-P	Field mustard	cytosol	53.88	41.9
CDY10517	Canola	cytosol	55.1	41.8
GSMUA_Achr2P09310_001	Banana	cytosol, peroxisome, plastid	51.84	41.64
Os03t0196600-01	Rice	cytosol, plasma membrane	53.47	41.59
VIT_00s0194g00120.t01	Wine grape	plastid	48.57	38.89
Os03t0185000-00	Rice	cytosol, plasma membrane	46.94	38.21
PGSC0003DMT400037270	Potato	plastid	56.73	38.08
Solyc10g006040.1.1	Tomato	extracellular	56.73	38.08
VIT_19s0015g00130.t01	Wine grape	mitochondrion	56.33	36.6
KRH73892	Soybean	mitochondrion	52.24	35.96
KRH14245	Soybean	mitochondrion	51.43	35.9
KRH46343	Soybean	mitochondrion	55.1	34.88
KRG98542	Soybean	mitochondrion	55.51	34.78
AT3G13110.1	Thale cress	mitochondrion, plastid	54.29	34.02
Bra034705.1-P	Field mustard	plastid	54.29	33.84
GSMUA_Achr5P19080_001	Banana	cytosol	44.49	32.15

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP02510_001	EnsemblPlants:GSMUA_AchrUn_randomT02510_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG02510_001	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	InterPro:Hexapep	InterPro:Hexapep_transf_CS	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR42811
PANTHER:PTHR42811:SF2	PFAM:PF00132	ScanProsite:PS00101	SUPFAM:SSF51161	UniParc:UPI000294A6A0	UniProt:M0U5R3
MapMan:4.1.4.2.1	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02510_001]

Coordinates

chrchrUn_random:-:12466822..12467858

Molecular Weight (calculated)

26689.6 Da

IEP (calculated)

9.570

GRAVY (calculated)

0.122

Length

245 amino acids

Sequence
(BLAST)

001: MVDLSLVDEV WCRIQEEARA VAEEEPLLHK LYDDLGFMAL QAHRVAHRLW IEGRRSVALL LQSRVSEVFA VDIHPGARIG AGVLLDHATG LVIGETAVVG
101: DDVSFLHGVT LGGTGKEIGD RHPKIGDGVL IGAGTQVLGN VRIGKGAKIG AGSVVLKPVP PRTTAVGNPA RLIGGKEKPV RLESRAGLTM DHTSWSASQF
201: VLSRLSFSLP FPYYLHIIWS RNKQETRFSR VPFSLILLCI KRELL

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.