Factsheet for HORVU4Hr1G071040.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G071040.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	HORVU4Hr1G071040.1	AT1G55920.1	9076992
AT3G13110.1	HORVU4Hr1G071040.1	AT3G13110.1	11168407

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G263300.1	Wheat	mitochondrion	92.99	94.5
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	93.63	93.63
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	92.99	92.99
EER92698	Sorghum	cytosol	76.75	77.49
Os03t0196600-01	Rice	cytosol, plasma membrane	76.75	76.51
Zm00001d028154_P001	Maize	cytosol	75.8	75.8
Os03t0185000-00	Rice	cytosol, plasma membrane	70.38	73.42
GSMUA_Achr6P24840_001	Banana	cytosol	31.53	60.37
CDY52913	Canola	cytosol	48.41	57.36
GSMUA_AchrUn_...	Banana	cytosol	42.99	55.1
HORVU0Hr1G022440.1	Barley	mitochondrion	52.55	54.46
Bra038031.1-P	Field mustard	cytosol	50.64	53.72
CDX84336	Canola	cytosol	52.87	52.7
CDY53752	Canola	cytosol	51.59	52.6
CDY08269	Canola	cytosol	52.23	52.06
Bra037094.1-P	Field mustard	cytosol	51.59	51.43
PGSC0003DMT400057095	Potato	cytosol	54.14	51.36
AT1G55920.1	Thale cress	cytosol	50.96	50.96
CDY26079	Canola	cytosol	51.91	50.94
Solyc07g065340.1.1	Tomato	cytosol	53.5	50.76
CDY42400	Canola	cytosol	51.27	50.0
Bra030821.1-P	Field mustard	cytosol	51.27	50.0
CDY10517	Canola	cytosol	51.27	49.85
VIT_00s0194g00120.t01	Wine grape	plastid	48.41	49.67
KRH00049	Soybean	mitochondrion	24.84	45.61
VIT_19s0015g00130.t01	Wine grape	mitochondrion	53.82	44.83
Solyc10g006040.1.1	Tomato	extracellular	51.91	44.66
KRH05125	Soybean	mitochondrion	22.29	44.59
PGSC0003DMT400037270	Potato	plastid	51.27	44.11
KRH14245	Soybean	mitochondrion	47.45	42.45
KRH73892	Soybean	mitochondrion	47.77	42.13
HORVU0Hr1G035820.1	Barley	plastid	52.55	41.56
Bra034705.1-P	Field mustard	plastid	51.59	41.22
AT3G13110.1	Thale cress	mitochondrion, plastid	51.27	41.18
KRH46343	Soybean	mitochondrion	50.64	41.09
KRG98542	Soybean	mitochondrion	50.96	40.92
HORVU4Hr1G081310.6	Barley	mitochondrion	40.76	39.63

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:2.160.10.10	MapMan:4.1.4.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:HORVU4Hr1G071040	EnsemblPlants:HORVU4Hr1G071040.1	InterPro:Hexapep	InterPro:Hexapep_transf_CS	UniProt:M0XGU3	PFAM:PF00132
PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF3	SMART:SM00971
SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002949460
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:578904597..578906428

Molecular Weight (calculated)

32836.5 Da

IEP (calculated)

6.637

GRAVY (calculated)

0.079

Length

314 amino acids

Sequence
(BLAST)

001: MAACVDKWNP AYSCHRISRS IYRFMPDCTI TASTGAAVNG SGGSCNGGDQ VWEELYGEAQ ADAEDEPLLG MLYYELVLSH PSLEAALAAH LSAKLCIQGA
101: LPQDALRDIL VGALAAHPEA IRHTRADLLA ARDRDPACAK MVHCFLYYKG FLALQAHRAA HALWSEGRRP PALLLQSRAS EVFGVDIHPG ARIGGGILLD
201: HATGIVIGET AVIGDDVSIL HGVTLGGTGK VCGDRHPKVG DGVLIGAGAS VLGNVRIGAG AKIGAGAVVL RDVECGTTAV GNPAKPIGKK AAPSLRPEEQ
301: PGVTMEQRWS DYVI

Best Arabidopsis Sequence Match ( AT1G55920.1 )
(BLAST)

001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI

Arabidopsis Description

SAT1Serine acetyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.