Factsheet for VIT_00s0194g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00120.t01
VIT_05s0094g00780.t01
VIT_19s0015g00130.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	VIT_00s0194g00120.t01	AT1G55920.1	9076992
AT1G55920.1	VIT_19s0015g00130.t01	AT1G55920.1	9076992
AT3G13110.1	VIT_00s0194g00120.t01	AT3G13110.1	11168407
AT3G13110.1	VIT_19s0015g00130.t01	AT3G13110.1	11168407
AT3G13110.1	VIT_05s0094g00780.t01	AT3G59760.1	11168407
AT3G13110.1	VIT_05s0094g00780.t01	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52913	Canola	cytosol	51.63	59.62
Bra038031.1-P	Field mustard	cytosol	54.9	56.76
GSMUA_Achr6P24840_001	Banana	cytosol	30.07	56.1
CDY53752	Canola	cytosol	54.9	54.55
CDY10517	Canola	cytosol	56.86	53.87
AT1G55920.1	Thale cress	cytosol	55.23	53.82
CDY08269	Canola	cytosol	55.23	53.65
CDX84336	Canola	cytosol	54.9	53.33
Bra037094.1-P	Field mustard	cytosol	54.58	53.02
CDY26079	Canola	cytosol	55.23	52.81
CDY42400	Canola	cytosol	55.56	52.8
Bra030821.1-P	Field mustard	cytosol	55.56	52.8
VIT_19s0015g00130.t01	Wine grape	mitochondrion	63.07	51.19
VIT_11s0016g02450.t01	Wine grape	cytosol	46.41	48.97
GSMUA_AchrUn_...	Banana	cytosol	38.89	48.57
TraesCS4B01G263300.1	Wheat	mitochondrion	49.02	48.54
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	49.67	48.41
EER92698	Sorghum	cytosol	48.37	47.59
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	48.69	47.45
Os03t0196600-01	Rice	cytosol, plasma membrane	48.69	47.3
Zm00001d028154_P001	Maize	cytosol	48.37	47.13
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	48.37	47.13
Os03t0185000-00	Rice	cytosol, plasma membrane	45.75	46.51
Bra034705.1-P	Field mustard	plastid	56.54	44.02
AT3G13110.1	Thale cress	mitochondrion, plastid	56.21	43.99
VIT_04s0210g00190.t01	Wine grape	cytosol	40.85	37.76

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	EntrezGene:100260128	wikigene:100260128	Gene3D:2.160.10.10
MapMan:4.1.4.2.1	ProteinID:CCB50050	ProteinID:CCB50050.1	ncoils:Coil	UniProt:F6HCV5	EMBL:FN595527
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	InterPro:Hexapep	InterPro:Hexapep_transf_CS	EntrezGene:LOC100260128
wikigene:LOC100260128	PFAM:PF00132	PFAM:PF06426	PIRSF:PIRSF000441	ScanProsite:PS00101	PANTHER:PTHR42811
PANTHER:PTHR42811:SF2	SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172
InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002109B06	ArrayExpress:VIT_00s0194g00120	EnsemblPlantsGene:VIT_00s0194g00120	EnsemblPlants:VIT_00s0194g00120.t01	RefSeq:XP_002270544
RefSeq:XP_002270544.2	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:10619982..10621326

Molecular Weight (calculated)

33110.9 Da

IEP (calculated)

8.172

GRAVY (calculated)

-0.082

Length

306 amino acids

Sequence
(BLAST)

001: MAACIHNSRT STEAAASPFS QDSADHQCQI RNSPWFAKKC KPSFQNLFSC DPIKRVRLQA DKEDDVLWLK IREQALCDME QEPILSKYYC SSILQHDSLE
101: SALSNQLAAK LSNTDLPRST LMEVFAGVLA EDEEVRRAIR ADLKAVKERD PACISYAHCF LNFKGFLACQ AHRVAHKLWS QGRIVMALLI QSRVSEVFAV
201: DIHPGAKLGH GVVLDHATGI VIGETAVIGD NVTILHNVTL GGTGKVNGDR HPKVGDGVLI GAGTKVLGSI RVGDRAKIGA GSVVLKEVPP ETTSVGNPAR
301: LVGLKS

Best Arabidopsis Sequence Match ( AT3G13110.1 )
(BLAST)

001: MLPVTSRRHF TMSLYMLRSS SPHINHHSFL LPSFVSSKFK HHTLSPPPSP PPPPPMAACI DTCRTGKPQI SPRDSSKHHD DESGFRYMNY FRYPDRSSFN
101: GTQTKTLHTR PLLEDLDRDA EVDDVWAKIR EEAKSDIAKE PIVSAYYHAS IVSQRSLEAA LANTLSVKLS NLNLPSNTLF DLFSGVLQGN PDIVESVKLD
201: LLAVKERDPA CISYVHCFLH FKGFLACQAH RIAHELWTQD RKILALLIQN RVSEAFAVDF HPGAKIGTGI LLDHATAIVI GETAVVGNNV SILHNVTLGG
301: TGKQCGDRHP KIGDGVLIGA GTCILGNITI GEGAKIGAGS VVLKDVPPRT TAVGNPARLL GGKDNPKTHD KIPGLTMDQT SHISEWSDYV I

Arabidopsis Description

SAT3Serine acetyltransferase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39218]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.