Factsheet for VIT_05s0094g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00120.t01
VIT_05s0094g00780.t01
VIT_19s0015g00130.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59760.1	VIT_00s0194g00120.t01	AT3G13110.1	11168407
AT3G59760.1	VIT_19s0015g00130.t01	AT3G13110.1	11168407
AT3G59760.1	VIT_00s0194g00120.t01	AT3G13110.1	12063244
AT3G59760.1	VIT_19s0015g00130.t01	AT3G13110.1	12063244
AT3G59760.1	VIT_05s0094g00780.t01	AT3G59760.1	11168407

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50190	Soybean	nucleus, plastid	83.51	82.01
KRH71273	Soybean	nucleus, plastid	82.72	80.2
GSMUA_Achr5P17120_001	Banana	plastid	80.1	79.69
GSMUA_Achr9P02430_001	Banana	plastid	77.75	78.16
Solyc08g014340.2.1	Tomato	plastid	76.96	76.17
PGSC0003DMT400059624	Potato	cytosol, plastid	76.96	76.17
CDY17914	Canola	plastid	77.75	75.77
CDY23400	Canola	plastid	76.7	75.32
Bra037682.1-P	Field mustard	plastid	76.44	75.06
Bra004781.1-P	Field mustard	plastid	77.75	75.0
CDX79804	Canola	plastid	77.75	75.0
CDY30438	Canola	plastid	76.18	74.81
Os01t0978100-01	Rice	plastid	76.7	74.37
AT2G43750.1	Thale cress	plastid	75.65	73.72
EES02674	Sorghum	plastid	76.44	72.64
TraesCS3A01G087100.1	Wheat	plastid	73.82	72.49
Zm00001d040235_P005	Maize	plastid	75.13	72.47
TraesCS3B01G102500.1	Wheat	golgi, plastid	74.35	72.45
TraesCS3D01G087300.1	Wheat	plastid	74.35	72.45
Zm00001d008379_P001	Maize	plastid	75.13	72.11
VIT_14s0030g01520.t01	Wine grape	cytosol	59.69	70.59
CDY45790	Canola	plastid	75.39	67.45
CDX89032	Canola	plastid	75.65	67.37
Bra014529.1-P	Field mustard	plastid	74.35	67.3
AT3G59760.1	Thale cress	plastid	75.39	66.51
VIT_14s0030g01550.t01	Wine grape	cytosol	58.64	65.5
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	60.21	58.97
VIT_08s0056g00820.t01	Wine grape	plastid	57.59	56.41
VIT_15s0046g02300.t01	Wine grape	mitochondrion	53.66	55.26
VIT_04s0044g00250.t01	Wine grape	mitochondrion	49.48	52.65
VIT_14s0030g01490.t01	Wine grape	cytosol	59.16	51.48
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	63.87	34.81
VIT_19s0015g00380.t01	Wine grape	plastid	26.96	24.47

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100233046	wikigene:100233046	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2
ProteinID:ABY86366	ProteinID:ABY86366.1	ProteinID:CBI24697	ProteinID:CBI24697.3	InterPro:CysK	InterPro:Cys_synth
UniProt:D7T2G6	EMBL:EU275237	EMBL:FN595507	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019344	GO:GO:0030170	EntrezGene:LOC100233046	wikigene:LOC100233046	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI00019834C1	ArrayExpress:VIT_05s0094g00780	EnsemblPlantsGene:VIT_05s0094g00780	EnsemblPlants:VIT_05s0094g00780.t01
unigene:Vvi.2365	RefSeq:XP_002277485	RefSeq:XP_002277485.1	RefSeq:XP_003632085	RefSeq:XP_003632085.1	SEG:seg

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:D7T2G6]

Coordinates

chr5:-:24094768..24103828

Molecular Weight (calculated)

40615.3 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.082

Length

382 amino acids

Sequence
(BLAST)

001: MASLINPSTN FCNSKVRTGS RVSQQLRVNP LSLNLKNNQR GKVSFSVVCK AVSVKPQTDV EGLNIAEDVT QLIGKTPMVY LNNIVKGSVA NIAAKLEIME
101: PCCSVKDRIG YSMIADAEQR GAITPGKSTL VEPTSGNTGI GLAFIAASKG YKLILTMPAS MSMERRVLLK AFGAELVLTD PAKGMKGAVQ KAEEILKSTP
201: NAYMLQQFDN PANPKVHYQT TGPEIWEDTR GKVDIFIAGI GTGGTISGVG KFLKKQNPNI KVIGVEPLES NILSGGKPGP HKIQGIGAGF VPSNLDQDVV
301: DEVIEISSDE AVETAKQLAL QEGLLVGISS GAAAAAAMKV GKRPENAGKL IAVVFPSFGE RYLSTALFQT IRDECEKMQP EP

Best Arabidopsis Sequence Match ( AT2G43750.2 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.