Factsheet for VIT_19s0015g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 4
plastid 4
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	mitochondrion
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol, mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057393	Potato	plastid	78.38	78.57
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	78.38	78.38
AT1G55880.1	Thale cress	endoplasmic reticulum	76.48	76.48
KRH14231	Soybean	mitochondrion	75.77	75.06
Bra038025.1-P	Field mustard	plastid	76.25	74.31
CDY52906	Canola	plastid	76.25	74.31
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	75.77	73.84
CDY53756	Canola	endoplasmic reticulum	76.25	73.29
TraesCS4A01G079100.1	Wheat	plastid	72.45	69.48
TraesCS4B01G245100.1	Wheat	plastid	72.45	69.16
TraesCS4D01G244300.1	Wheat	plastid	72.45	69.16
Os03t0215800-01	Rice	plastid	73.63	68.89
EER95270	Sorghum	plastid	73.4	68.06
HORVU4Hr1G067610.1	Barley	plastid	72.92	65.18
KRH73904	Soybean	cytosol	64.37	64.22
Zm00001d028220_P001	Maize	plastid	72.68	62.45
VIT_14s0030g01520.t01	Wine grape	cytosol	26.37	34.37
VIT_14s0030g01550.t01	Wine grape	cytosol	26.37	32.46
VIT_15s0046g02300.t01	Wine grape	mitochondrion	25.18	28.57
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	25.18	27.18
VIT_05s0094g00780.t01	Wine grape	plastid	24.47	26.96
VIT_08s0056g00820.t01	Wine grape	plastid	24.7	26.67
VIT_04s0044g00250.t01	Wine grape	mitochondrion	22.33	26.18
VIT_14s0030g01490.t01	Wine grape	cytosol	26.37	25.28
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	25.42	15.26

Protein Annotations

EntrezGene:100260099	wikigene:100260099	Gene3D:3.40.50.1100	MapMan:35.1	EMBL:AM444300	ProteinID:CAN80713
ProteinID:CAN80713.1	ProteinID:CBI39726	ProteinID:CBI39726.3	UniProt:D7UAG1	EMBL:FN596747	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030170	EntrezGene:LOC100260099
wikigene:LOC100260099	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314
PANTHER:PTHR10314:SF35	SUPFAM:SSF53686	TIGR:TC64714	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0001985798	ArrayExpress:VIT_19s0015g00380
EnsemblPlantsGene:VIT_19s0015g00380	EnsemblPlants:VIT_19s0015g00380.t01	unigene:Vvi.19111	RefSeq:XP_002266459	RefSeq:XP_002266459.1	SEG:seg

Description

No Description!

Coordinates

chr19:+:8363730..8368312

Molecular Weight (calculated)

44928.7 Da

IEP (calculated)

7.327

GRAVY (calculated)

-0.099

Length

421 amino acids

Sequence
(BLAST)

001: MAPVKATGAV FAALSIAVLS YLLCNSRSRK THKPISKKKP RRGLIEAIGN TPLIRINSLS EATGCEILGK AEFLNPGGSV KDRVAVKIIE EALESGQLAP
101: GGVVTEGSAG STAISLATVA PAYGCKCHVV IPDDVAIEKS QILEALGATV ERVRPVSITH KDHYVNVARR RALEANEFAS KHGKYIGMDA DGLVPANGHI
201: SEEEKQNSVF SSNCKGGFFA DQFENLANFR AHYEGTGPEI WEQTSGDLHA FVAAAGTGGT LAGVSRSLQE KSPNIKCFLI DPPGSGLFNK ITRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTQNFLMA ELDGAFHGTD MEAVEMSRYL LKNDGLFVGS SSAMNCVGAV RVAQSIGPGH TIVTILCDSG MRHLSKFYDS
401: QYLSQHGLTP TATGLEFLGI S

Best Arabidopsis Sequence Match ( AT1G55880.1 )
(BLAST)

001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K

Arabidopsis Description

At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.