Factsheet for Bra038025.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52906	Canola	plastid	99.54	99.54
AT1G55880.1	Thale cress	endoplasmic reticulum	85.88	88.12
VIT_19s0015g00380.t01	Wine grape	plastid	74.31	76.25
KRH14231	Soybean	mitochondrion	73.38	74.59
PGSC0003DMT400057393	Potato	plastid	72.45	74.52
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	72.45	74.35
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	69.68	69.68
TraesCS4D01G244300.1	Wheat	plastid	70.6	69.16
TraesCS4B01G245100.1	Wheat	plastid	70.6	69.16
TraesCS4A01G079100.1	Wheat	plastid	69.91	68.79
Os03t0215800-01	Rice	plastid	70.14	67.33
EER95270	Sorghum	plastid	70.37	66.96
KRH73904	Soybean	cytosol	63.89	65.4
HORVU4Hr1G067610.1	Barley	plastid	70.14	64.33
Zm00001d028220_P001	Maize	plastid	69.91	61.63
Bra039708.1-P	Field mustard	cytosol	24.07	32.3
Bra036910.1-P	Field mustard	plastid	23.61	31.97
Bra036115.1-P	Field mustard	cytosol	23.84	31.89
Bra036114.1-P	Field mustard	cytosol	24.07	30.41
Bra009985.1-P	Field mustard	cytosol	18.75	29.24
Bra014436.1-P	Field mustard	mitochondrion	23.15	27.17
Bra001131.1-P	Field mustard	mitochondrion	25.0	27.0
Bra007604.1-P	Field mustard	mitochondrion	22.92	26.9
Bra037682.1-P	Field mustard	plastid	23.84	26.48
Bra036448.1-P	Field mustard	plastid	23.38	25.7
Bra004781.1-P	Field mustard	plastid	23.15	25.25
Bra014529.1-P	Field mustard	plastid	24.31	24.88
Bra020605.1-P	Field mustard	mitochondrion	24.54	24.42
Bra040417.1-P	Field mustard	cytosol	15.28	21.15

Protein Annotations

Gene3D:3.40.50.1100	MapMan:35.1	EnsemblPlantsGene:Bra038025	EnsemblPlants:Bra038025.1	EnsemblPlants:Bra038025.1-P	GO:GO:0005575
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	UniProt:M4FAB1	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF35	SUPFAM:SSF53686	TMHMM:TMhelix	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000253EDC7
SEG:seg	:	:	:	:	:

Description

AT1G55880 (E=1e-194) | pyridoxal-5'-phosphate-dependent enzyme, beta family protein

Coordinates

chrA06:+:55710..57480

Molecular Weight (calculated)

46105.2 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.070

Length

432 amino acids

Sequence
(BLAST)

001: MAPVKITGAV VAAAATMGML SFCFFRFSSD KLDSCSSSSS SKKKKKLSTR NGLVDAIGNT PLIRINSLSD ATGSEILGKC EFLNPGGSVK DRVAVKIIEE
101: ALESGLLFPG GIVTEGSAGS TAISLATVAP AYGCQCHVVI PDDAAIEKSQ IIEALGATVE RVRPVSITHK DHFVNIARRR ADQANDLASS SKTRLASRIN
201: VAHQEKTNGC TAEEQKVPSL FSESVTGGFF ADQFENLANY RAHYEGTGPE IWQQTHGNID AFVAAAGTGG TLAGVSRFLQ EKNEKVKCFL IDPPGSGLFN
301: KVTRGVMYTR EEAEGRRLKN PFDTITEGIG INRLTQNFLM AKIDGGFRGT DKEAVEMSRF LLKKDGLFVG SSSAMNCVGA VRVAQALGPG HTIVTILCDS
401: GMRHLSKFHD PQYLALYGLT PTAVGLEFLG IK

Best Arabidopsis Sequence Match ( AT1G55880.1 )
(BLAST)

001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K

Arabidopsis Description

At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.