Factsheet for Bra036115.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19702	Canola	mitochondrion	100.0	92.02
AT5G28030.2	Thale cress	cytosol	90.09	90.09
Bra009985.1-P	Field mustard	cytosol	74.3	86.64
Bra036114.1-P	Field mustard	cytosol	81.11	76.61
KRH13764	Soybean	cytosol	72.45	72.9
VIT_14s0030g01520.t01	Wine grape	cytosol	70.28	70.28
KRH34037	Soybean	cytosol	69.97	69.97
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	69.97	69.54
KRG92757	Soybean	cytosol	69.35	69.35
KRH34052	Soybean	cytosol	69.35	69.14
KRH43690	Soybean	cytosol	48.92	67.81
KXG24064	Sorghum	cytosol	67.49	67.08
Zm00001d031136_P003	Maize	plasma membrane	67.49	67.08
TraesCS5D01G027600.1	Wheat	cytosol, golgi	67.18	66.77
GSMUA_Achr11P...	Banana	cytosol	66.87	66.67
GSMUA_Achr4P21350_001	Banana	cytosol	66.87	66.46
VIT_14s0030g01550.t01	Wine grape	cytosol	70.28	66.37
Solyc01g097940.1.1	Tomato	plasma membrane	39.94	65.82
GSMUA_Achr9P25760_001	Banana	cytosol	65.63	65.43
Solyc01g097950.2.1	Tomato	cytosol	65.33	65.33
Solyc01g097930.2.1	Tomato	cytosol	65.02	65.02
Bra039708.1-P	Field mustard	cytosol	64.71	64.91
HORVU3Hr1G040910.1	Barley	mitochondrion	6.81	64.71
Bra036910.1-P	Field mustard	plastid	63.47	64.26
Bra001131.1-P	Field mustard	mitochondrion	78.02	63.0
TraesCS2B01G316800.1	Wheat	cytosol	63.16	62.39
Bra020605.1-P	Field mustard	mitochondrion	83.59	62.21
TraesCS2A01G300600.1	Wheat	cytosol	62.85	62.08
Solyc01g097920.2.1	Tomato	cytosol, plastid	68.42	62.08
Os12t0625000-01	Rice	plasma membrane	65.33	60.81
HORVU2Hr1G074630.2	Barley	cytosol	53.56	59.66
KXG26295	Sorghum	cytosol	62.54	57.71
Zm00001d003717_P001	Maize	cytosol	62.23	57.1
TraesCS2D01G298600.2	Wheat	cytosol	63.16	56.98
KRG92761	Soybean	cytosol	57.28	55.89
Bra037682.1-P	Field mustard	plastid	66.87	55.53
Bra004781.1-P	Field mustard	plastid	66.56	54.29
HORVU5Hr1G015070.1	Barley	extracellular	11.15	52.94
VIT_14s0030g01490.t01	Wine grape	cytosol	69.66	51.25
Bra014529.1-P	Field mustard	plastid	66.25	50.71
Bra040417.1-P	Field mustard	cytosol	48.92	50.64
TraesCS5A01G022200.1	Wheat	plastid	66.87	50.47
TraesCS5B01G018700.3	Wheat	plastid	67.8	49.89
HORVU5Hr1G005980.2	Barley	plastid	66.87	49.43
Bra007604.1-P	Field mustard	mitochondrion	54.8	48.1
Bra014436.1-P	Field mustard	mitochondrion	54.49	47.83
Bra036448.1-P	Field mustard	plastid	56.66	46.56
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	24.77	42.78
HORVU1Hr1G031220.3	Barley	plastid	36.84	29.24
Bra038025.1-P	Field mustard	plastid	31.89	23.84

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	EnsemblPlantsGene:Bra036115	EnsemblPlants:Bra036115.1
EnsemblPlants:Bra036115.1-P	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005488	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	GO:GO:0080145	GO:GO:0080146
UniProt:M4F4W1	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314
PANTHER:PTHR10314:SF97	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002541F45
SEG:seg	:	:	:	:	:

Description

AT5G28030 (E=4e-155) | cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative

Coordinates

chrA09:+:2647470..2649335

Molecular Weight (calculated)

34453.0 Da

IEP (calculated)

5.125

GRAVY (calculated)

0.056

Length

323 amino acids

Sequence
(BLAST)

001: MEDRYMIKND VTELIGNTPM VYLNKIVDGC VARIAAKLEM MEPCSSIKDR IAYSMIKDAE DKGLITPGKS TLIEATGGNT GIGLASIGAA RGYRVILLMP
101: STMSLERRII LRALGAELHL TDMNIGIKGM LEKAEEILSK TPGGYIPHQF LNPENPEIHY RTTGPEIWRD SAGEVDILVA GAGTGGTVSG TGRFLKKMNK
201: NIKVCVVEPT ESAVLSGGEP GPHLIQGIGP GVIPTNLDLS IVDEVIQVTS EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIVVIFPSG
301: GERYLSTELF ESVRYEAEHL SID

Best Arabidopsis Sequence Match ( AT5G28030.1 )
(BLAST)

001: MEDRVLIKND VTELIGNTPM VYLNKIVDGC VARIAAKLEM MEPCSSIKDR IAYSMIKDAE DKGLITPGKS TLIEATGGNT GIGLASIGAS RGYKVILLMP
101: STMSLERRII LRALGAEVHL TDISIGIKGQ LEKAKEILSK TPGGYIPHQF INPENPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTVTG TGKFLKEKNK
201: DIKVCVVEPS ESAVLSGGKP GPHLIQGIGS GEIPANLDLS IVDEIIQVTG EEAIETTKLL AIKEGLLVGI SSGASAAAAL KVAKRPENVG KLIVVIFPSG
301: GERYLSTELF ESVRYEAENL PVE

Arabidopsis Description

DES1Bifunctional cystathionine gamma-lyase/cysteine synthase [Source:UniProtKB/Swiss-Prot;Acc:F4K5T2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.