Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G373800.1 | |
| TraesCS6B01G411500.1 | |
| TraesCS6D01G358000.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | TraesCS6A01G373800.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6B01G411500.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6D01G358000.1 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G316800.1 | Wheat | cytosol | 89.66 | 98.17 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 87.99 | 96.33 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 74.86 | 92.41 |
| KRH77854 | Soybean | cytosol | 16.2 | 78.38 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 70.11 | 77.23 |
| KXG26295 | Sorghum | cytosol | 74.58 | 76.29 |
| Zm00001d003717_P001 | Maize | cytosol | 73.74 | 75.0 |
| KRG96937 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 67.6 | 74.46 |
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 67.32 | 74.15 |
| KRH68699 | Soybean | cytosol | 67.32 | 74.15 |
| KRH27640 | Soybean | cytosol | 67.04 | 73.85 |
| Solyc09g082060.2.1 | Tomato | cytosol, nucleus, plastid | 66.76 | 73.54 |
| PGSC0003DMT400082113 | Potato | cytosol | 66.48 | 73.23 |
| KRG91325 | Soybean | cytosol, mitochondrion, nucleus | 65.64 | 72.31 |
| KRH35519 | Soybean | cytosol | 60.06 | 70.49 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 63.41 | 70.28 |
| Bra039708.1-P | Field mustard | cytosol | 63.13 | 70.19 |
| AT4G14880.5 | Thale cress | cytosol | 63.13 | 70.19 |
| CDY68436 | Canola | cytosol | 63.13 | 70.19 |
| AT3G22460.1 | Thale cress | cytosol | 48.88 | 70.0 |
| CDY42795 | Canola | cytosol | 62.57 | 69.57 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 58.66 | 69.31 |
| Bra036910.1-P | Field mustard | plastid | 61.45 | 68.97 |
| CDY09039 | Canola | cytosol | 58.94 | 67.63 |
| KRH13764 | Soybean | cytosol | 60.06 | 66.98 |
| KRH34037 | Soybean | cytosol | 60.34 | 66.87 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 62.57 | 65.5 |
| KRG92757 | Soybean | cytosol | 58.66 | 65.02 |
| KRH34052 | Soybean | cytosol | 58.66 | 64.81 |
| Solyc01g097950.2.1 | Tomato | cytosol | 58.38 | 64.71 |
| KRH43690 | Soybean | cytosol | 41.9 | 64.38 |
| CDY50768 | Canola | cytosol | 57.54 | 64.17 |
| CDY69239 | Canola | cytosol | 57.54 | 64.17 |
| CDY05586 | Canola | cytosol | 57.82 | 64.09 |
| AT5G28030.2 | Thale cress | cytosol | 57.82 | 64.09 |
| CDY52498 | Canola | cytosol | 57.82 | 64.09 |
| CDY41911 | Canola | cytosol | 57.26 | 63.86 |
| CDY41913 | Canola | cytosol | 54.19 | 63.82 |
| AT5G28020.1 | Thale cress | cytosol | 57.54 | 63.78 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 34.92 | 63.78 |
| CDX74160 | Canola | cytosol | 56.7 | 63.24 |
| Bra036115.1-P | Field mustard | cytosol | 56.98 | 63.16 |
| CDX80680 | Canola | cytosol | 53.35 | 62.83 |
| CDX86187 | Canola | cytosol | 53.35 | 62.83 |
| Bra009985.1-P | Field mustard | cytosol | 48.6 | 62.82 |
| AT3G04940.1 | Thale cress | cytosol | 56.7 | 62.65 |
| CDY00007 | Canola | cytosol | 56.42 | 62.54 |
| Solyc01g097930.2.1 | Tomato | cytosol | 55.87 | 61.92 |
| CDY19703 | Canola | cytosol | 55.87 | 61.92 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 60.61 | 60.96 |
| CDY00008 | Canola | mitochondrion | 57.26 | 58.4 |
| CDY19702 | Canola | mitochondrion | 56.98 | 58.12 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 62.29 | 57.18 |
| Bra036114.1-P | Field mustard | cytosol | 54.19 | 56.73 |
| TraesCS3D01G087300.1 | Wheat | plastid | 62.01 | 56.63 |
| KRG92761 | Soybean | cytosol | 51.12 | 55.29 |
| TraesCS3D01G332100.1 | Wheat | plastid | 54.75 | 51.72 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 62.85 | 51.25 |
| Bra001131.1-P | Field mustard | mitochondrion | 57.26 | 51.25 |
| TraesCS7D01G363000.1 | Wheat | cytosol | 48.04 | 50.74 |
| Bra020605.1-P | Field mustard | mitochondrion | 57.26 | 47.23 |
| TraesCS7D01G096800.1 | Wheat | cytoskeleton, cytosol, plastid | 45.53 | 46.97 |
| TraesCS6D01G174200.1 | Wheat | cytosol | 36.31 | 45.14 |
| CDY41915 | Canola | cytosol | 7.54 | 43.55 |
| Bra040417.1-P | Field mustard | cytosol | 37.15 | 42.63 |
| TraesCS7D01G096700.1 | Wheat | mitochondrion | 45.81 | 41.41 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.6 | 34.52 |
| TraesCS4D01G244300.1 | Wheat | plastid | 32.68 | 26.53 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:50.2.5 | InterPro:CysK | InterPro:Cys_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep |
| ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF157 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 |
| EnsemblPlantsGene:TraesCS2D01G298600 | EnsemblPlants:TraesCS2D01G298600.2 | InterPro:Trypto_synt_PLP_dependent | TIGR:cd01561 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:380711487..380713335
Molecular Weight (calculated)
37946.1 Da
IEP (calculated)
4.986
GRAVY (calculated)
0.226
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQWCPSETI AKDVTELIGR TPLVYLNKVV TGCEARVAAK LEIMGPCSSI KDRIGYSMIA DAEEKGLITP GKSVLIEPTG GNTGIGLAFM AAAKGYKLIV
101: TMPSSVSTER RTVLKAFGAE VVLTDPLRAM DDVVRRAEEI AARTPNSYVL QQFENPANTK VHYETTGPEI WSGTAGAVDI LVAGIGTGGT ITGAGKYLKE
201: MNPEIQIYGV EPSESAVLSG GKPGPHKIQG LGAGFVPGVL DVSILDEVFQ ITNEEAASMA RQIALKEGLL VGMSSGATAV AAIRVARRVE NRGKLIVVSA
301: VLPLGSSEYC LLAVVSSFTV FFVLCSLQVV FASCGERYLS SFLFESIRNE AENMVFEP
101: TMPSSVSTER RTVLKAFGAE VVLTDPLRAM DDVVRRAEEI AARTPNSYVL QQFENPANTK VHYETTGPEI WSGTAGAVDI LVAGIGTGGT ITGAGKYLKE
201: MNPEIQIYGV EPSESAVLSG GKPGPHKIQG LGAGFVPGVL DVSILDEVFQ ITNEEAASMA RQIALKEGLL VGMSSGATAV AAIRVARRVE NRGKLIVVSA
301: VLPLGSSEYC LLAVVSSFTV FFVLCSLQVV FASCGERYLS SFLFESIRNE AENMVFEP
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.