CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09039	Canola	cytosol	97.69	94.87
Bra036910.1-P	Field mustard	plastid	99.01	94.04
CDY42795	Canola	cytosol	99.67	93.79
CDY68436	Canola	cytosol	98.02	92.24
AT4G14880.5	Thale cress	cytosol	95.71	90.06
PGSC0003DMT400082113	Potato	cytosol	86.14	80.31
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	85.81	80.0
KRH27640	Soybean	cytosol	83.83	78.15
KRH77854	Soybean	cytosol	18.81	77.03
HORVU3Hr1G040910.1	Barley	mitochondrion	8.58	76.47
KXG24064	Sorghum	cytosol	81.52	76.0
Zm00001d031136_P003	Maize	plasma membrane	81.19	75.69
TraesCS5D01G027600.1	Wheat	cytosol, golgi	81.19	75.69
KRG91325	Soybean	cytosol, mitochondrion, nucleus	80.53	75.08
GSMUA_Achr4P21350_001	Banana	cytosol	79.87	74.46
GSMUA_Achr9P25760_001	Banana	cytosol	78.88	73.77
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	78.88	73.54
GSMUA_Achr11P...	Banana	cytosol	78.55	73.46
KRH35519	Soybean	cytosol	69.31	68.85
Os12t0625000-01	Rice	plasma membrane	78.55	68.59
CDX86187	Canola	cytosol	67.0	66.78
CDX80680	Canola	cytosol	66.01	65.79
CDY69239	Canola	cytosol	68.98	65.11
CDY41911	Canola	cytosol	68.98	65.11
CDY50768	Canola	cytosol	68.65	64.8
TraesCS2B01G316800.1	Wheat	cytosol	69.31	64.22
CDX74160	Canola	cytosol	67.99	64.17
TraesCS2A01G300600.1	Wheat	cytosol	68.32	63.3
HORVU5Hr1G015070.1	Barley	extracellular	14.19	63.24
CDY52498	Canola	cytosol	67.0	62.85
HORVU2Hr1G074630.2	Barley	cytosol	59.74	62.41
CDY05586	Canola	cytosol	66.34	62.23
CDY41913	Canola	cytosol	62.05	61.84
CDY00007	Canola	cytosol	65.68	61.61
CDY19703	Canola	cytosol	65.02	60.99
TraesCS2D01G298600.2	Wheat	cytosol	69.31	58.66
KXG26295	Sorghum	cytosol	67.66	58.57
Zm00001d003717_P001	Maize	cytosol	67.0	57.67
TraesCS5A01G022200.1	Wheat	plastid	80.86	57.24
CDY00008	Canola	mitochondrion	66.01	56.98
CDY19702	Canola	mitochondrion	65.68	56.7
HORVU5Hr1G005980.2	Barley	plastid	81.19	56.29
TraesCS5B01G018700.3	Wheat	plastid	80.86	55.81
CDY30438	Canola	plastid	71.62	55.78
CDY23400	Canola	plastid	71.29	55.53
CDY17914	Canola	plastid	71.29	55.1
CDX79804	Canola	plastid	71.29	54.55
CDY45790	Canola	plastid	70.96	50.35
CDX89032	Canola	plastid	70.96	50.12
CDX89116	Canola	mitochondrion	60.4	49.73
CDY43932	Canola	mitochondrion	60.07	49.46
CDX71737	Canola	mitochondrion	60.07	49.46
CDY48919	Canola	endoplasmic reticulum	50.16	48.25
CDY29946	Canola	plastid	61.06	47.19
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	29.04	47.06
CDY21176	Canola	plastid	60.73	46.82
CDY41915	Canola	cytosol	8.91	43.55
CDY68838	Canola	mitochondrion	14.85	33.09
HORVU1Hr1G031220.3	Barley	plastid	41.58	30.96
CDY52906	Canola	plastid	30.69	21.53
CDY53756	Canola	endoplasmic reticulum	31.02	21.46

Protein Annotations

EnsemblPlants:CDY29778	EnsemblPlantsGene:GSBRNA2T00043643001	Gene3D:3.40.50.1100	GO:A0A078GYW5	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:P-phosphate_BS	InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent
PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	PFAM:PF00291	ProteinID:CDY29778	ProteinID:CDY29778.1	ScanProsite:PS00901
SEG:seg	SUPFAM:SSF53686	UniParc:UPI0004EE38D2	UniProt:A0A078GYW5	MapMan:50.2.5	:

Description

BnaA01g18880DBnaA01g18880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYW5]

Coordinates

chrLK032243:-:468263..470904

Molecular Weight (calculated)

32216.2 Da

IEP (calculated)

5.949

GRAVY (calculated)

0.055

Length

303 amino acids

Sequence
(BLAST)

001: MASRIANDVT ELIGNTPLVY LNSVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSVERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTD GKYLKEQNPN VKLYGVEPIE SAILSGGKPG
201: PHKIQGIGAG FIPSVLEVNL IDEVVQVSSD ESIDMARLLA RKEGLLVGIS SGAAAAAAIK LAKRPENAGK LFVAVFPSFG ERYLSTVLFD ATRKEAESMT
301: FEA

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.