Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d051988_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | Zm00001d051988_P001 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26295 | Sorghum | cytosol | 90.06 | 90.57 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 74.15 | 79.82 |
| KRH77854 | Soybean | cytosol | 16.76 | 79.73 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 64.77 | 78.62 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 73.01 | 78.59 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 68.18 | 73.85 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 75.0 | 73.74 |
| Zm00001d031136_P003 | Maize | plasma membrane | 67.33 | 72.92 |
| KRG96937 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 67.33 | 72.92 |
| KRH68699 | Soybean | cytosol | 66.19 | 71.69 |
| KRH27640 | Soybean | cytosol | 66.19 | 71.69 |
| PGSC0003DMT400082113 | Potato | cytosol | 65.34 | 70.77 |
| Solyc09g082060.2.1 | Tomato | cytosol, nucleus, plastid | 65.06 | 70.46 |
| KRG91325 | Soybean | cytosol, mitochondrion, nucleus | 64.77 | 70.15 |
| KRH35519 | Soybean | cytosol | 59.38 | 68.52 |
| AT3G22460.1 | Thale cress | cytosol | 48.58 | 68.4 |
| AT4G14880.5 | Thale cress | cytosol | 61.65 | 67.39 |
| CDY42795 | Canola | cytosol | 61.65 | 67.39 |
| Bra036910.1-P | Field mustard | plastid | 60.8 | 67.08 |
| Bra039708.1-P | Field mustard | cytosol | 61.36 | 67.08 |
| CDY68436 | Canola | cytosol | 61.36 | 67.08 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 57.67 | 67.0 |
| KRH13764 | Soybean | cytosol | 61.08 | 66.98 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 61.36 | 66.87 |
| KRH43690 | Soybean | cytosol | 43.18 | 65.24 |
| CDY09039 | Canola | cytosol | 57.67 | 65.06 |
| KRG92757 | Soybean | cytosol | 59.66 | 65.02 |
| KRH34052 | Soybean | cytosol | 59.66 | 64.81 |
| Solyc01g097950.2.1 | Tomato | cytosol | 59.09 | 64.4 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 62.5 | 64.33 |
| KRH34037 | Soybean | cytosol | 58.81 | 64.09 |
| CDY50768 | Canola | cytosol | 57.95 | 63.55 |
| CDY41911 | Canola | cytosol | 57.67 | 63.24 |
| AT5G28030.2 | Thale cress | cytosol | 57.67 | 62.85 |
| CDY69239 | Canola | cytosol | 56.82 | 62.31 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 34.66 | 62.24 |
| Bra036115.1-P | Field mustard | cytosol | 57.1 | 62.23 |
| AT3G04940.1 | Thale cress | cytosol | 57.1 | 62.04 |
| CDY05586 | Canola | cytosol | 56.53 | 61.61 |
| CDY52498 | Canola | cytosol | 56.53 | 61.61 |
| CDX74160 | Canola | cytosol | 55.97 | 61.37 |
| AT5G28020.1 | Thale cress | cytosol | 56.25 | 61.3 |
| CDY41913 | Canola | cytosol | 52.84 | 61.18 |
| Solyc01g097930.2.1 | Tomato | cytosol | 55.97 | 60.99 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 61.65 | 60.96 |
| CDY00007 | Canola | cytosol | 55.68 | 60.68 |
| CDY19703 | Canola | cytosol | 55.4 | 60.37 |
| Bra009985.1-P | Field mustard | cytosol | 47.44 | 60.29 |
| CDX80680 | Canola | cytosol | 51.7 | 59.87 |
| CDX86187 | Canola | cytosol | 51.7 | 59.87 |
| CDY00008 | Canola | mitochondrion | 57.39 | 57.55 |
| CDY19702 | Canola | mitochondrion | 57.1 | 57.27 |
| Zm00001d040235_P005 | Maize | plastid | 63.92 | 56.82 |
| Zm00001d008379_P001 | Maize | plastid | 63.64 | 56.28 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 61.65 | 55.64 |
| Bra036114.1-P | Field mustard | cytosol | 53.41 | 54.97 |
| KRG92761 | Soybean | cytosol | 50.0 | 53.17 |
| Zm00001d004413_P002 | Maize | mitochondrion | 56.25 | 51.83 |
| Zm00001d045327_P001 | Maize | cytosol, extracellular | 48.86 | 49.71 |
| Bra001131.1-P | Field mustard | mitochondrion | 56.25 | 49.5 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 61.36 | 49.2 |
| Zm00001d045340_P004 | Maize | cytosol | 48.86 | 48.59 |
| Bra020605.1-P | Field mustard | mitochondrion | 55.68 | 45.16 |
| Bra040417.1-P | Field mustard | cytosol | 36.93 | 41.67 |
| Zm00001d045344_P001 | Maize | mitochondrion | 24.72 | 40.85 |
| Zm00001d045347_P001 | Maize | mitochondrion | 24.72 | 40.85 |
| Zm00001d045341_P003 | Maize | mitochondrion | 24.43 | 40.38 |
| CDY41915 | Canola | cytosol | 7.1 | 40.32 |
| Zm00001d045350_P001 | Maize | mitochondrion | 21.31 | 35.71 |
| Zm00001d043101_P001 | Maize | plastid | 19.03 | 34.54 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 66.76 | 33.52 |
| Zm00001d028220_P001 | Maize | plastid | 33.52 | 24.08 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:50.2.5 | UniProt:A0A1D6EB44 | InterPro:CysK |
| InterPro:Cys_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019344 |
| ProteinID:ONM17570.1 | InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep | ScanProsite:PS00901 | PANTHER:PTHR10314 |
| PANTHER:PTHR10314:SF157 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI0008436D65 |
| EnsemblPlantsGene:Zm00001d003717 | EnsemblPlants:Zm00001d003717_P001 | EnsemblPlants:Zm00001d003717_T001 | SEG:seg | : | : |
Description
Cysteine synthase 1
Coordinates
chr2:-:56263508..56265622
Molecular Weight (calculated)
36509.9 Da
IEP (calculated)
6.313
GRAVY (calculated)
0.045
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCSSSSTT ETVQDEGSKT AKDQGPKIAE DVTQLIGKTP LVYLNKVVAG CEARVAAKLE IMAPCSSVKD RIGYSMIADA EEKGLITPGK VLNTSPLSVL
101: IEPTGGNTGI GLAFMAAAKG YRLVVAMPSS VSTERRAVLR AFGAEVVLTD PLLSMDGVVR KAQEVAARTP GAHVLQQFAN PANPRAHYEA TGPEIWSATA
201: GKVDALVAGI GTGGTVTGAG RYLKEKNPAI KVYGVEPSDS AVLSGGKPGP HKIQGLGAGF VPGVLDVSLL DEVFQVSNEE AAGMAKQIAR EEGLLVGISS
301: GAAAVAAVRV ARRAENRGKL IVAIFASFGE RYLSSFMYES LKEEAESMAF EP
101: IEPTGGNTGI GLAFMAAAKG YRLVVAMPSS VSTERRAVLR AFGAEVVLTD PLLSMDGVVR KAQEVAARTP GAHVLQQFAN PANPRAHYEA TGPEIWSATA
201: GKVDALVAGI GTGGTVTGAG RYLKEKNPAI KVYGVEPSDS AVLSGGKPGP HKIQGLGAGF VPGVLDVSLL DEVFQVSNEE AAGMAKQIAR EEGLLVGISS
301: GAAAVAAVRV ARRAENRGKL IVAIFASFGE RYLSSFMYES LKEEAESMAF EP
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.