Factsheet for Zm00001d045340_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19308	Sorghum	cytosol	93.79	95.13
HORVU2Hr1G072450.2	Barley	cytosol	21.19	81.52
Zm00001d045327_P001	Maize	cytosol, extracellular	79.38	81.21
Os06t0149900-01	Rice	cytosol	79.38	80.98
TraesCS7D01G096800.1	Wheat	cytoskeleton, cytosol, plastid	78.81	80.4
TraesCS4A01G401700.1	Wheat	cytosol	78.53	80.12
HORVU7Hr1G021860.7	Barley	cytosol	78.25	79.6
TraesCS7A01G102800.1	Wheat	cytosol	77.97	79.54
TraesCS4A01G401600.1	Wheat	cytosol	77.97	79.31
TraesCS7A01G102700.1	Wheat	cytosol	77.4	78.74
OQU75837	Sorghum	cytosol	54.52	72.83
TraesCS7D01G096700.1	Wheat	mitochondrion	77.97	69.7
GSMUA_Achr2P16640_001	Banana	cytosol	66.1	68.82
HORVU7Hr1G021840.21	Barley	plastid	72.6	68.35
Zm00001d045347_P001	Maize	mitochondrion	40.4	67.14
Zm00001d045344_P001	Maize	mitochondrion	40.11	66.67
Zm00001d045341_P003	Maize	mitochondrion	39.83	66.2
Zm00001d045350_P001	Maize	mitochondrion	34.75	58.57
Zm00001d031136_P003	Maize	plasma membrane	47.46	51.69
Zm00001d003717_P001	Maize	cytosol	48.59	48.86
Zm00001d004413_P002	Maize	mitochondrion	48.87	45.29
Zm00001d008379_P001	Maize	plastid	48.31	42.96
Zm00001d040235_P005	Maize	plastid	47.18	42.17
Zm00001d043101_P001	Maize	plastid	18.64	34.02
Zm00001d028220_P001	Maize	plastid	27.4	19.8

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100216991	Gene3D:3.40.50.1100	MapMan:50.2.5	UniProt:A0A1D6NVD1
ProteinID:AQL02087.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
PFAM:PF00291	InterPro:PLP-dep	PANTHER:PTHR10314	PANTHER:PTHR10314:SF114	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0008439394	EnsemblPlantsGene:Zm00001d045340	EnsemblPlants:Zm00001d045340_P004	EnsemblPlants:Zm00001d045340_T004
SEG:seg	:	:	:	:	:

Description

Pyridoxal-5'-phosphate-dependent enzyme family protein

Coordinates

chr9:-:19216321..19218442

Molecular Weight (calculated)

37968.1 Da

IEP (calculated)

6.175

GRAVY (calculated)

-0.045

Length

354 amino acids

Sequence
(BLAST)

001: MDGEEVGRRG IPTLLKPSSS SSDGSAGEQE HIASDVTQLI GWTPLVELKR IASEAGIDAR IVGKMEAYQP LCSIKDRSAL RMIEDAEERG LISPGVTTLV
101: EPTSGNMGLG LVLFAIQRGY RLIAVMPAKY SLDKQILLRF MGAELYLTDP ALGFPGMFDK VEQLRKQLPN VHVLNQVTNK ANSEAHFRLT GPEIWKDTAG
201: KVDVFVAGSG TGGTVSGVGK YLKMQKPGVK IICVEPAESP VISGGAPGKH KIQGVGPGFL PEVLDTSVID ETVTVSTEEA MANARRLARE EGLLVGISSG
301: ANLAACLKLP WLKVASRQEN KGKMIVTVFP SGGERYINSD LFADVREECI AMTF

Best Arabidopsis Sequence Match ( AT2G43750.1 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.