Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G040910.1 | Barley | mitochondrion | 16.3 | 44.12 |
| HORVU5Hr1G015070.1 | Barley | extracellular | 27.17 | 36.76 |
| HORVU7Hr1G021860.7 | Barley | cytosol | 97.83 | 25.86 |
| KXG19309 | Sorghum | cytosol | 92.39 | 24.57 |
| Os06t0149900-01 | Rice | cytosol | 91.3 | 24.21 |
| OQU75833 | Sorghum | cytosol | 63.04 | 23.67 |
| Zm00001d045327_P001 | Maize | cytosol, extracellular | 88.04 | 23.41 |
| HORVU7Hr1G021840.21 | Barley | plastid | 95.65 | 23.4 |
| KXG19308 | Sorghum | cytosol | 82.61 | 21.78 |
| Zm00001d045340_P004 | Maize | cytosol | 81.52 | 21.19 |
| GSMUA_Achr2P16640_001 | Banana | cytosol | 78.26 | 21.18 |
| HORVU7Hr1G087810.12 | Barley | cytosol, mitochondrion | 70.65 | 18.57 |
| OQU75837 | Sorghum | cytosol | 53.26 | 18.49 |
| HORVU6Hr1G063480.6 | Barley | endoplasmic reticulum | 61.96 | 14.39 |
| HORVU5Hr1G082120.2 | Barley | mitochondrion, plastid | 28.26 | 13.9 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 43.48 | 13.79 |
| HORVU3Hr1G079890.1 | Barley | plastid | 47.83 | 11.28 |
| HORVU1Hr1G031220.3 | Barley | plastid | 48.91 | 11.06 |
| HORVU5Hr1G005980.2 | Barley | plastid | 52.17 | 10.98 |
| HORVU2Hr1G000280.3 | Barley | golgi, peroxisome, plastid | 50.0 | 10.09 |
| HORVU4Hr1G067610.1 | Barley | plastid | 20.65 | 4.03 |
| HORVU7Hr1G023500.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G072450.2 | EnsemblPlantsGene:HORVU2Hr1G072450 | Gene3D:3.40.50.1100 | InterPro:PLP-dep | InterPro:Trypto_synt_PLP_dependent | PANTHER:PTHR10314 |
| PANTHER:PTHR10314:SF114 | PFAM:PF00291 | SUPFAM:SSF53686 | UniParc:UPI000B481EB4 | UniProt:A0A287IEX3 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:+:519644154..519644584
Molecular Weight (calculated)
10006.4 Da
IEP (calculated)
5.037
GRAVY (calculated)
0.255
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: IEDAEEKGLI SPGVTTLVEP TSGNLGLGLV LIALRKGYRF VAVMPGQYSL DKQILLRYMG AELFITDPAL GFPGLVDKVE QLKKELPNVH VL
001: MVAMIMASRF NREAKLASQI LSTLLGNRSC YTSMAATSSS ALLLNPLTSS SSSSTLRRFR CSPEISSLSF SSASDFSLAM KRQSRSFADG SERDPSVVCE
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VSLFASGRDI YRPRCSSLSG KRWRKCSLRY EH
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VSLFASGRDI YRPRCSSLSG KRWRKCSLRY EH
Arabidopsis Description
OASCCysteine synthase [Source:UniProtKB/TrEMBL;Acc:B9DFR6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.