Factsheet for HORVU3Hr1G040910.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G087990.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	HORVU6Hr1G087990.4	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G015070.1	Barley	extracellular	97.06	48.53
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	100.0	18.18
HORVU2Hr1G072450.2	Barley	cytosol	44.12	16.3
AT3G22460.1	Thale cress	cytosol	85.29	11.6
Solyc01g097940.1.1	Tomato	plasma membrane	61.76	10.71
KRH43690	Soybean	cytosol	70.59	10.3
Os12t0625000-01	Rice	plasma membrane	100.0	9.8
Zm00001d031136_P003	Maize	plasma membrane	91.18	9.54
KXG24064	Sorghum	cytosol	91.18	9.54
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	91.18	9.54
HORVU2Hr1G074630.2	Barley	cytosol	73.53	8.62
CDY29778	Canola	cytosol, peroxisome, plastid	76.47	8.58
HORVU1Hr1G031220.3	Barley	plastid	100.0	8.35
CDY09039	Canola	cytosol	76.47	8.33
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	79.41	8.31
PGSC0003DMT400082113	Potato	cytosol	79.41	8.31
KRH27640	Soybean	cytosol	79.41	8.31
KRH35519	Soybean	cytosol	73.53	8.2
Bra036910.1-P	Field mustard	plastid	76.47	8.15
Bra039708.1-P	Field mustard	cytosol	76.47	8.07
CDY68436	Canola	cytosol	76.47	8.07
CDY42795	Canola	cytosol	76.47	8.07
AT4G14880.5	Thale cress	cytosol	76.47	8.07
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.47	8.0
KRH68699	Soybean	cytosol	76.47	8.0
HORVU5Hr1G005980.2	Barley	plastid	100.0	7.78
KRG91325	Soybean	cytosol, mitochondrion, nucleus	73.53	7.69
KRH13764	Soybean	cytosol	70.59	7.48
Bra009985.1-P	Field mustard	cytosol	58.82	7.22
CDY41911	Canola	cytosol	67.65	7.17
AT3G04940.1	Thale cress	cytosol	67.65	7.1
CDY69239	Canola	cytosol	64.71	6.85
CDY50768	Canola	cytosol	64.71	6.85
CDY52498	Canola	cytosol	64.71	6.81
Solyc01g097930.2.1	Tomato	cytosol	64.71	6.81
AT5G28020.1	Thale cress	cytosol	64.71	6.81
CDY00007	Canola	cytosol	64.71	6.81
Bra036115.1-P	Field mustard	cytosol	64.71	6.81
CDY19703	Canola	cytosol	64.71	6.81
CDX80680	Canola	cytosol	58.82	6.58
CDX86187	Canola	cytosol	58.82	6.58
CDX74160	Canola	cytosol	61.76	6.54
CDY05586	Canola	cytosol	61.76	6.5
Bra036114.1-P	Field mustard	cytosol	64.71	6.43
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	73.53	6.41
CDY19702	Canola	mitochondrion	64.71	6.27
KRG92757	Soybean	cytosol	58.82	6.19
Solyc01g097920.2.1	Tomato	cytosol, plastid	64.71	6.18
KRH34052	Soybean	cytosol	58.82	6.17
CDY00008	Canola	mitochondrion	61.76	5.98
Solyc01g097950.2.1	Tomato	cytosol	55.88	5.88
AT5G28030.2	Thale cress	cytosol	55.88	5.88
KRH34037	Soybean	cytosol	55.88	5.88
VIT_14s0030g01520.t01	Wine grape	cytosol	55.88	5.88
VIT_14s0030g01550.t01	Wine grape	cytosol	58.82	5.85
KRG92761	Soybean	cytosol	55.88	5.74
CDY41913	Canola	cytosol	50.0	5.59
Bra001131.1-P	Field mustard	mitochondrion	64.71	5.5
Bra020605.1-P	Field mustard	mitochondrion	64.71	5.07
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	67.65	5.04
HORVU3Hr1G079890.1	Barley	plastid	52.94	4.62
VIT_14s0030g01490.t01	Wine grape	cytosol	55.88	4.33
HORVU7Hr1G021860.7	Barley	cytosol	44.12	4.31
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	44.12	4.29
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	82.35	3.99
HORVU7Hr1G021840.21	Barley	plastid	44.12	3.99
HORVU6Hr1G063480.6	Barley	endoplasmic reticulum	41.18	3.54
HORVU4Hr1G067610.1	Barley	plastid	29.41	2.12
Bra040417.1-P	Field mustard	cytosol	17.65	1.92
KRH77854	Soybean	cytosol	0.0	0.0
CDY41915	Canola	cytosol	0.0	0.0
HORVU7Hr1G023500.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G040910.1	EnsemblPlantsGene:HORVU3Hr1G040910	Gene3D:3.40.50.1100	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160
SUPFAM:SSF53686	UniParc:UPI000B47BFF7	UniProt:A0A287KV37	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:-:253540459..253540721

Molecular Weight (calculated)

3753.9 Da

IEP (calculated)

10.871

GRAVY (calculated)

0.694

Length

34 amino acids

Sequence
(BLAST)

1: MAAAKGYRLV LTMPASMSME RRIILKAFGA ELIL

Best Arabidopsis Sequence Match ( AT3G59760.1 )
(BLAST)

001: MVAMIMASRF NREAKLASQI LSTLLGNRSC YTSMAATSSS ALLLNPLTSS SSSSTLRRFR CSPEISSLSF SSASDFSLAM KRQSRSFADG SERDPSVVCE
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VVFPSFGERY LSTPLFQSIR EEVEKMQPER VSG

Arabidopsis Description

OASCCysteine synthase [Source:UniProtKB/TrEMBL;Acc:B9DFR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.