Factsheet for HORVU5Hr1G082120.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G087990.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	HORVU6Hr1G087990.4	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040910.1	Barley	mitochondrion	18.18	100.0
HORVU5Hr1G015070.1	Barley	extracellular	23.53	64.71
HORVU1Hr1G031220.3	Barley	plastid	90.91	41.77
AT3G22460.1	Thale cress	cytosol	48.66	36.4
Zm00001d031136_P003	Maize	plasma membrane	61.5	35.38
KXG24064	Sorghum	cytosol	60.96	35.08
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	60.43	34.77
Os12t0625000-01	Rice	plasma membrane	64.17	34.58
KRH43690	Soybean	cytosol	42.25	33.91
PGSC0003DMT400082113	Potato	cytosol	57.75	33.23
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	57.75	33.23
KRH27640	Soybean	cytosol	57.22	32.92
KRH68699	Soybean	cytosol	56.68	32.62
AT4G14880.5	Thale cress	cytosol	56.15	32.61
CDY42795	Canola	cytosol	56.15	32.61
Bra036910.1-P	Field mustard	plastid	55.62	32.6
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	56.15	32.31
KRG91325	Soybean	cytosol, mitochondrion, nucleus	56.15	32.31
Bra039708.1-P	Field mustard	cytosol	55.62	32.3
CDY68436	Canola	cytosol	55.62	32.3
HORVU2Hr1G074630.2	Barley	cytosol	47.59	30.69
CDY29778	Canola	cytosol, peroxisome, plastid	47.06	29.04
KRH13764	Soybean	cytosol	49.73	28.97
CDY09039	Canola	cytosol	48.13	28.85
HORVU5Hr1G005980.2	Barley	plastid	67.38	28.83
HORVU2Hr1G072450.2	Barley	cytosol	13.9	28.26
KRG92757	Soybean	cytosol	48.13	27.86
KRH34052	Soybean	cytosol	48.13	27.78
VIT_14s0030g01520.t01	Wine grape	cytosol	47.59	27.55
KRH35519	Soybean	cytosol	44.38	27.21
VIT_14s0030g01550.t01	Wine grape	cytosol	47.59	26.02
AT5G28020.1	Thale cress	cytosol	44.92	26.01
Solyc01g097950.2.1	Tomato	cytosol	44.38	25.7
CDY69239	Canola	cytosol	43.85	25.55
CDY41911	Canola	cytosol	43.85	25.55
Solyc01g097940.1.1	Tomato	plasma membrane	26.74	25.51
CDY52498	Canola	cytosol	43.85	25.39
CDY19703	Canola	cytosol	43.85	25.39
CDY00007	Canola	cytosol	43.85	25.39
KRH34037	Soybean	cytosol	43.85	25.39
CDY50768	Canola	cytosol	43.32	25.23
AT5G28030.2	Thale cress	cytosol	43.32	25.08
CDY05586	Canola	cytosol	43.32	25.08
Solyc01g097920.2.1	Tomato	cytosol, plastid	47.59	25.0
CDY41913	Canola	cytosol	40.64	25.0
CDX74160	Canola	cytosol	42.78	24.92
Solyc01g097930.2.1	Tomato	cytosol	42.78	24.77
Bra036115.1-P	Field mustard	cytosol	42.78	24.77
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	51.34	24.62
AT3G04940.1	Thale cress	cytosol	42.25	24.38
Bra036114.1-P	Field mustard	cytosol	42.78	23.39
CDY19702	Canola	mitochondrion	42.78	22.79
CDY00008	Canola	mitochondrion	42.25	22.51
CDX86187	Canola	cytosol	36.36	22.37
KRG92761	Soybean	cytosol	39.57	22.36
CDX80680	Canola	cytosol	35.83	22.04
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	38.5	20.57
Bra001131.1-P	Field mustard	mitochondrion	43.85	20.5
HORVU3Hr1G079890.1	Barley	plastid	42.25	20.26
VIT_14s0030g01490.t01	Wine grape	cytosol	47.06	20.05
HORVU7Hr1G021860.7	Barley	cytosol	36.36	19.54
Bra020605.1-P	Field mustard	mitochondrion	44.38	19.12
HORVU7Hr1G023500.1	Barley	cytosol	10.7	18.87
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	45.45	18.64
HORVU7Hr1G021840.21	Barley	plastid	36.36	18.09
Bra009985.1-P	Field mustard	cytosol	26.74	18.05
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	58.29	15.55
HORVU6Hr1G063480.6	Barley	endoplasmic reticulum	32.62	15.4
Bra040417.1-P	Field mustard	cytosol	24.6	14.74
HORVU4Hr1G067610.1	Barley	plastid	26.74	10.62
CDY41915	Canola	cytosol	1.6	4.84
KRH77854	Soybean	cytosol	1.07	2.7

Protein Annotations

EnsemblPlants:HORVU5Hr1G082120.2	EnsemblPlantsGene:HORVU5Hr1G082120	Gene3D:3.40.50.1100	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	PFAM:PF00291	SEG:seg
SUPFAM:SSF53686	TMHMM:TMhelix	UniParc:UPI000B47ECC1	UniProt:A0A287S0U0	MapMan:50.2.5	:

Description

No Description!

Coordinates

chrchr5H:+:566226818..566231148

Molecular Weight (calculated)

20944.0 Da

IEP (calculated)

9.340

GRAVY (calculated)

0.094

Length

187 amino acids

Sequence
(BLAST)

001: MAAAKGYRLV LTMPASMSME RRIILKAFGA ELILTNPLFG MKGAVQKAEE LAAKTPNSYI LQQFENAANP KIHYETTGPE IWKGTGGKID GLVSGIGTGG
101: TITGSGKYLR EKNPNIKVAT RMLFGLRYVH EGICFSAKYY LLMPSKYRCV LYLLWSYLCM DAMQLYVYMD AMEFWMYGCY GILIYGS

Best Arabidopsis Sequence Match ( AT3G22460.2 )
(BLAST)

001: MASVAPKIAK DVTELIGNTP LVYLNKVAKD CVGHVAAKLE MMEPCSSVKD RIGYSMIADA EAKGLIKPGE SVLIEPTSGN TGVGLAFTAA AKGYKLVITM
101: PASMSIERRI ILLAFGAELI LTDPAKGMKG AVAKAEEILA KTPNGYMLQQ FENPANPKIH YETTGPEIWK GSGGKVDGFV SGIGTGGT

Arabidopsis Description

OASA2O-acetylserine (thiol) lyase (OAS-TL) isoform A2 [Source:TAIR;Acc:AT3G22460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.