CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19702	Canola	mitochondrion	98.58	98.58
AT5G28030.2	Thale cress	cytosol	82.34	89.47
CDX80680	Canola	cytosol	74.07	85.53
CDX86187	Canola	cytosol	74.07	85.53
CDY52498	Canola	cytosol	78.63	85.45
CDY05586	Canola	cytosol	78.35	85.14
CDY00007	Canola	cytosol	76.35	82.97
CDY19703	Canola	cytosol	75.78	82.35
CDY69239	Canola	cytosol	72.08	78.82
CDX74160	Canola	cytosol	71.79	78.5
CDY41913	Canola	cytosol	66.38	76.64
CDY50768	Canola	cytosol	67.81	74.14
CDY41911	Canola	cytosol	67.81	74.14
KRH13764	Soybean	cytosol	65.81	71.96
KRH34037	Soybean	cytosol	64.1	69.66
VIT_14s0030g01520.t01	Wine grape	cytosol	64.1	69.66
KRG92757	Soybean	cytosol	63.53	69.04
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	63.82	68.92
KRH34052	Soybean	cytosol	63.53	68.83
KXG24064	Sorghum	cytosol	62.11	67.08
Zm00001d031136_P003	Maize	plasma membrane	62.11	67.08
KRH43690	Soybean	cytosol	44.44	66.95
TraesCS5D01G027600.1	Wheat	cytosol, golgi	61.82	66.77
GSMUA_Achr11P...	Banana	cytosol	61.54	66.67
GSMUA_Achr4P21350_001	Banana	cytosol	61.54	66.46
VIT_14s0030g01550.t01	Wine grape	cytosol	64.39	66.08
CDY29778	Canola	cytosol, peroxisome, plastid	56.98	66.01
GSMUA_Achr9P25760_001	Banana	cytosol	60.4	65.43
Solyc01g097950.2.1	Tomato	cytosol	60.11	65.33
CDY42795	Canola	cytosol	59.83	65.22
CDY68436	Canola	cytosol	59.83	65.22
CDY09039	Canola	cytosol	57.27	64.42
Solyc01g097930.2.1	Tomato	cytosol	59.26	64.4
Solyc01g097940.1.1	Tomato	plasma membrane	35.9	64.29
TraesCS2B01G316800.1	Wheat	cytosol	58.4	62.69
TraesCS2A01G300600.1	Wheat	cytosol	57.55	61.77
HORVU3Hr1G040910.1	Barley	mitochondrion	5.98	61.76
Solyc01g097920.2.1	Tomato	cytosol, plastid	62.39	61.52
Os12t0625000-01	Rice	plasma membrane	60.68	61.38
HORVU2Hr1G074630.2	Barley	cytosol	49.86	60.34
KXG26295	Sorghum	cytosol	57.83	58.0
Zm00001d003717_P001	Maize	cytosol	57.55	57.39
TraesCS2D01G298600.2	Wheat	cytosol	58.4	57.26
CDY41915	Canola	cytosol	9.97	56.45
KRG92761	Soybean	cytosol	52.71	55.89
CDY23400	Canola	plastid	61.25	55.27
CDY30438	Canola	plastid	60.97	55.01
CDY17914	Canola	plastid	60.97	54.59
CDX79804	Canola	plastid	60.97	54.04
HORVU5Hr1G015070.1	Barley	extracellular	9.97	51.47
VIT_14s0030g01490.t01	Wine grape	cytosol	63.53	50.8
TraesCS5A01G022200.1	Wheat	plastid	61.82	50.7
HORVU5Hr1G005980.2	Barley	plastid	62.39	50.11
TraesCS5B01G018700.3	Wheat	plastid	62.68	50.11
CDX89032	Canola	plastid	60.68	49.65
CDY45790	Canola	plastid	60.4	49.65
CDY43932	Canola	mitochondrion	49.86	47.55
CDX71737	Canola	mitochondrion	49.57	47.28
CDX89116	Canola	mitochondrion	49.57	47.28
CDY29946	Canola	plastid	52.71	47.19
CDY48919	Canola	endoplasmic reticulum	42.17	46.98
CDY21176	Canola	plastid	52.14	46.56
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	22.51	42.25
CDY68838	Canola	mitochondrion	12.82	33.09
HORVU1Hr1G031220.3	Barley	plastid	33.62	28.99
CDY52906	Canola	plastid	29.34	23.84
CDY53756	Canola	endoplasmic reticulum	29.63	23.74

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078EKY1	EnsemblPlants:CDY00008
ProteinID:CDY00008	ProteinID:CDY00008.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00109483001	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EC0783	SEG:seg	:	:

Description

BnaC09g02930D

Coordinates

chrLK031916:-:208358..210925

Molecular Weight (calculated)

37782.1 Da

IEP (calculated)

5.511

GRAVY (calculated)

0.056

Length

351 amino acids

Sequence
(BLAST)

001: MFIVAFKELR ACYVLCYSRN NEFSRQTSME ERYMIKNDVT ELIGNTPMVY LNKIVDGCVA RVAAKLEMME PCSSIKDRIA YSMIKDAEDK GLITPGKSTL
101: IEATGGNTGI GLASIGAARG YRVILLMPST MSLERRIILR ALGAEVHLTD MNIGIKGMLE KAEEILSKTP GGYIPHQFLN PENPEIHYRT TGPEIWRDSA
201: GEVDILVAGA GTGGTVSGTG RFLKKMNKNI KVCVVEPTES AVLSGGEPGP HLIQGIGPGV IPTNLDLSIV DEVIQVTSEE AIETAKLLAL KEGLLVGISS
301: GAAAAAALKV AKRPENAGKL IVVIFPSGGE RYLSTELFEA VRYEAEHLSI D

Best Arabidopsis Sequence Match ( AT5G28030.1 )
(BLAST)

001: MEDRVLIKND VTELIGNTPM VYLNKIVDGC VARIAAKLEM MEPCSSIKDR IAYSMIKDAE DKGLITPGKS TLIEATGGNT GIGLASIGAS RGYKVILLMP
101: STMSLERRII LRALGAEVHL TDISIGIKGQ LEKAKEILSK TPGGYIPHQF INPENPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTVTG TGKFLKEKNK
201: DIKVCVVEPS ESAVLSGGKP GPHLIQGIGS GEIPANLDLS IVDEIIQVTG EEAIETTKLL AIKEGLLVGI SSGASAAAAL KVAKRPENVG KLIVVIFPSG
301: GERYLSTELF ESVRYEAENL PVE

Arabidopsis Description

DES1Bifunctional cystathionine gamma-lyase/cysteine synthase [Source:UniProtKB/Swiss-Prot;Acc:F4K5T2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.