Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G373800.1 | |
| TraesCS6B01G411500.1 | |
| TraesCS6D01G358000.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | TraesCS6A01G373800.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6B01G411500.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6D01G358000.1 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 72.89 | 98.46 |
| Zm00001d031136_P003 | Maize | plasma membrane | 67.2 | 90.77 |
| KXG24064 | Sorghum | cytosol | 67.2 | 90.77 |
| Os12t0625000-01 | Rice | plasma membrane | 69.7 | 88.18 |
| TraesCS5A01G022200.1 | Wheat | plastid | 85.42 | 87.62 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 63.78 | 86.15 |
| HORVU5Hr1G005980.2 | Barley | plastid | 83.6 | 83.98 |
| Solyc09g082060.2.1 | Tomato | cytosol, nucleus, plastid | 61.5 | 83.08 |
| PGSC0003DMT400082113 | Potato | cytosol | 61.28 | 82.77 |
| AT4G14880.5 | Thale cress | cytosol | 60.36 | 82.3 |
| CDY68436 | Canola | cytosol | 60.36 | 82.3 |
| Bra039708.1-P | Field mustard | cytosol | 60.36 | 82.3 |
| KRH27640 | Soybean | cytosol | 60.36 | 81.54 |
| CDY42795 | Canola | cytosol | 59.68 | 81.37 |
| KRH68699 | Soybean | cytosol | 60.14 | 81.23 |
| Bra036910.1-P | Field mustard | plastid | 58.77 | 80.88 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 55.81 | 80.86 |
| AT3G22460.1 | Thale cress | cytosol | 46.01 | 80.8 |
| CDY09039 | Canola | cytosol | 56.95 | 80.13 |
| KRG96937 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 59.23 | 80.0 |
| KRH77854 | Soybean | cytosol | 13.44 | 79.73 |
| KRG91325 | Soybean | cytosol, mitochondrion, nucleus | 57.63 | 77.85 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 54.67 | 74.3 |
| KRH35519 | Soybean | cytosol | 51.48 | 74.1 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 55.13 | 74.01 |
| KRH13764 | Soybean | cytosol | 53.3 | 72.9 |
| KRG92757 | Soybean | cytosol | 52.39 | 71.21 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 55.13 | 70.76 |
| KRH34052 | Soybean | cytosol | 51.94 | 70.37 |
| KRH43690 | Soybean | cytosol | 36.9 | 69.53 |
| AT5G28020.1 | Thale cress | cytosol | 50.57 | 68.73 |
| CDY69239 | Canola | cytosol | 50.11 | 68.54 |
| CDY41911 | Canola | cytosol | 49.89 | 68.22 |
| CDY50768 | Canola | cytosol | 49.66 | 67.91 |
| Bra036115.1-P | Field mustard | cytosol | 49.89 | 67.8 |
| CDX74160 | Canola | cytosol | 49.43 | 67.6 |
| KRH34037 | Soybean | cytosol | 49.66 | 67.49 |
| CDY52498 | Canola | cytosol | 49.66 | 67.49 |
| Solyc01g097950.2.1 | Tomato | cytosol | 49.43 | 67.18 |
| AT3G04940.1 | Thale cress | cytosol | 49.43 | 66.98 |
| CDY00007 | Canola | cytosol | 49.2 | 66.87 |
| CDY05586 | Canola | cytosol | 49.2 | 66.87 |
| CDX86187 | Canola | cytosol | 46.24 | 66.78 |
| CDY19703 | Canola | cytosol | 48.97 | 66.56 |
| AT5G28030.2 | Thale cress | cytosol | 48.97 | 66.56 |
| CDY41913 | Canola | cytosol | 46.01 | 66.45 |
| Bra009985.1-P | Field mustard | cytosol | 41.91 | 66.43 |
| CDX80680 | Canola | cytosol | 45.79 | 66.12 |
| Solyc01g097930.2.1 | Tomato | cytosol | 47.84 | 65.02 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 28.93 | 64.8 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 52.16 | 64.33 |
| CDY19702 | Canola | mitochondrion | 50.11 | 62.68 |
| CDY00008 | Canola | mitochondrion | 50.11 | 62.68 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.9 | 61.79 |
| Bra036114.1-P | Field mustard | cytosol | 47.38 | 60.82 |
| TraesCS3B01G102500.1 | Wheat | golgi, plastid | 53.3 | 59.69 |
| Bra001131.1-P | Field mustard | mitochondrion | 50.11 | 55.0 |
| KRG92761 | Soybean | cytosol | 41.23 | 54.68 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 54.44 | 54.44 |
| TraesCS5B01G300800.1 | Wheat | mitochondrion | 46.47 | 53.97 |
| TraesCS3B01G370200.3 | Wheat | plastid | 43.96 | 51.19 |
| CDY41915 | Canola | cytosol | 7.06 | 50.0 |
| Bra020605.1-P | Field mustard | mitochondrion | 49.2 | 49.77 |
| TraesCS6B01G217200.2 | Wheat | cytosol | 35.99 | 46.33 |
| Bra040417.1-P | Field mustard | cytosol | 32.12 | 45.19 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 63.55 | 39.8 |
| TraesCS4B01G245100.1 | Wheat | plastid | 24.6 | 24.49 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:4.1.4.2.2 | InterPro:CysK | InterPro:Cys_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep |
| ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF160 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 |
| EnsemblPlantsGene:TraesCS5B01G018700 | EnsemblPlants:TraesCS5B01G018700.3 | InterPro:Trypto_synt_PLP_dependent | TIGR:cd01561 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:17979876..17983930
Molecular Weight (calculated)
46363.2 Da
IEP (calculated)
9.233
GRAVY (calculated)
-0.060
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MYAAVVQPSC APSLKAATAS AHIRWRQTPF IPVHERQPPP AGPAGSVMVH RGPRLRAEPA PISATNLSCI KPRGLRLPPP PTSSRTTSDS RHFVQLRPRE
101: DRFAAKSLVD GGMGEASTPA IAKDVTELIG NTPLVYLNKV TDGCVGRVAA KLESMEPCSS VKDRIGYSMI TDAEEKGFIV PGKVGSVLIE PTSGNTGIGL
201: AFMAAAKGYR LVLTMPASMS MERRIILKAF GAELILTDPL LGMKGAVQKA EELAAKTPNS YILQQFENPA NPKIHYETTG PEIWKGTGGK IDGLVSGIGT
301: GGTITGTGKY LKEQNSNIKL YGVEPTESAV LNGGKPGPHK IQGIGAGFIP GVLDVDIIDE TIQVSSDESI EMAKSLALKE GLLVGISSGA AAAAAIKVAQ
401: RPENAGKLFV VVFPSFGERY LSSVLFHSIK KEAESMVVE
101: DRFAAKSLVD GGMGEASTPA IAKDVTELIG NTPLVYLNKV TDGCVGRVAA KLESMEPCSS VKDRIGYSMI TDAEEKGFIV PGKVGSVLIE PTSGNTGIGL
201: AFMAAAKGYR LVLTMPASMS MERRIILKAF GAELILTDPL LGMKGAVQKA EELAAKTPNS YILQQFENPA NPKIHYETTG PEIWKGTGGK IDGLVSGIGT
301: GGTITGTGKY LKEQNSNIKL YGVEPTESAV LNGGKPGPHK IQGIGAGFIP GVLDVDIIDE TIQVSSDESI EMAKSLALKE GLLVGISSGA AAAAAIKVAQ
401: RPENAGKLFV VVFPSFGERY LSSVLFHSIK KEAESMVVE
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.