Factsheet for Bra001131.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69239	Canola	cytosol	78.5	97.82
CDX74160	Canola	cytosol	77.75	96.88
AT3G04940.1	Thale cress	cytosol	70.75	87.35
Bra036115.1-P	Field mustard	cytosol	63.0	78.02
Bra009985.1-P	Field mustard	cytosol	52.25	75.45
KRH13764	Soybean	cytosol	58.75	73.21
VIT_14s0030g01520.t01	Wine grape	cytosol	58.5	72.45
Bra020605.1-P	Field mustard	mitochondrion	76.5	70.51
KRG92757	Soybean	cytosol	56.75	70.28
KRH34052	Soybean	cytosol	56.75	70.06
KRH34037	Soybean	cytosol	56.5	69.97
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	56.5	69.54
Bra036114.1-P	Field mustard	cytosol	59.25	69.3
GSMUA_Achr4P21350_001	Banana	cytosol	56.0	68.92
Bra036910.1-P	Field mustard	plastid	54.5	68.34
Bra039708.1-P	Field mustard	cytosol	55.0	68.32
GSMUA_Achr9P25760_001	Banana	cytosol	55.25	68.21
GSMUA_Achr11P...	Banana	cytosol	55.0	67.9
Zm00001d031136_P003	Maize	plasma membrane	55.0	67.69
TraesCS5D01G027600.1	Wheat	cytosol, golgi	55.0	67.69
KXG24064	Sorghum	cytosol	54.75	67.38
KRH43690	Soybean	cytosol	39.0	66.95
Solyc01g097950.2.1	Tomato	cytosol	52.5	65.02
HORVU3Hr1G040910.1	Barley	mitochondrion	5.5	64.71
VIT_14s0030g01550.t01	Wine grape	cytosol	55.25	64.62
Solyc01g097940.1.1	Tomato	plasma membrane	31.5	64.29
Solyc01g097930.2.1	Tomato	cytosol	50.5	62.54
TraesCS2A01G300600.1	Wheat	cytosol	51.0	62.39
TraesCS2B01G316800.1	Wheat	cytosol	51.0	62.39
Os12t0625000-01	Rice	plasma membrane	54.0	62.25
Solyc01g097920.2.1	Tomato	cytosol, plastid	55.25	62.08
HORVU2Hr1G074630.2	Barley	cytosol	43.5	60.0
Bra037682.1-P	Field mustard	plastid	56.25	57.84
TraesCS2D01G298600.2	Wheat	cytosol	51.25	57.26
KXG26295	Sorghum	cytosol	49.75	56.86
Bra004781.1-P	Field mustard	plastid	56.25	56.82
KRG92761	Soybean	cytosol	46.75	56.5
Zm00001d003717_P001	Maize	cytosol	49.5	56.25
Bra040417.1-P	Field mustard	cytosol	42.5	54.49
VIT_14s0030g01490.t01	Wine grape	cytosol	57.75	52.62
HORVU5Hr1G015070.1	Barley	extracellular	8.75	51.47
Bra014529.1-P	Field mustard	plastid	54.0	51.18
TraesCS5A01G022200.1	Wheat	plastid	54.25	50.7
HORVU5Hr1G005980.2	Barley	plastid	54.75	50.11
TraesCS5B01G018700.3	Wheat	plastid	55.0	50.11
Bra007604.1-P	Field mustard	mitochondrion	45.25	49.18
Bra014436.1-P	Field mustard	mitochondrion	44.75	48.64
Bra036448.1-P	Field mustard	plastid	45.75	46.56
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	20.5	43.85
HORVU1Hr1G031220.3	Barley	plastid	30.0	29.48
Bra038025.1-P	Field mustard	plastid	27.0	25.0

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	Gene3D:3.40.50.1100	EnsemblPlantsGene:Bra001131
EnsemblPlants:Bra001131.1	EnsemblPlants:Bra001131.1-P	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003735
GO:GO:0003824	GO:GO:0004124	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0019538
UniProt:M4CAA2	HAMAP:MF_00545	InterPro:P-phosphate_BS	PFAM:PD006052	PFAM:PF00291	PFAM:PF01282
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e
SUPFAM:SSF53686	SUPFAM:SSF54189	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI00025409C6
SEG:seg	:	:	:	:	:

Description

AT3G04940 (E=3e-140) ATCYSD1, CYSD1 | CYSD1 (CYSTEINE SYNTHASE D1); cysteine synthase

Coordinates

chrA03:+:14900698..14904088

Molecular Weight (calculated)

43339.9 Da

IEP (calculated)

9.486

GRAVY (calculated)

-0.050

Length

400 amino acids

Sequence
(BLAST)

001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGFG LIYDNVESAK KFEPKYRLIR LIGNTPMVYL
101: NNIVDGCVAR IAAKLEMMEP CSSVKERIAY GMIKDAEDKG LITPGKSTLI EPTSGNTGIG LAFVGAAKGY KVVLTMPETM SLERKIILLA LGAEVHLTDT
201: KKGVQGLLDK AEEILSKTPD GIILHQFKNP SNPQTHYRTT GPEIWRDSAG EVDILVAGVG TGGTISGSGK FLKEKNKDLK VYGVEPTESA VLSGGQPGPH
301: LIQGIGAGIV PDNLDFNVLD EIIQVTSVEA IETARLLALK EGLLVGISSG AAAAAAIKVA KRPENAGKLI VVVFPSGGER YLSTQLFDSV RREAESLTFE

Best Arabidopsis Sequence Match ( AT3G04940.2 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.