Factsheet for Bra036448.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025315.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03630.1	Bra025315.1-P	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21176	Canola	plastid	100.0	100.0
AT3G03630.1	Thale cress	plastid	87.02	84.65
KRH64961	Soybean	nucleus, plastid	66.92	70.32
KRG94935	Soybean	nucleus	65.65	69.54
VIT_08s0056g00820.t01	Wine grape	plastid	65.9	66.41
Os01t0814800-01	Rice	plastid	61.83	61.99
EES03791	Sorghum	plastid	60.56	61.98
TraesCS3D01G332100.1	Wheat	plastid	59.54	61.74
TraesCS3B01G370200.3	Wheat	plastid	59.03	61.54
Bra039708.1-P	Field mustard	cytosol	50.38	61.49
TraesCS3A01G338600.3	Wheat	plastid	59.03	61.21
Bra036910.1-P	Field mustard	plastid	49.36	60.81
HORVU3Hr1G079890.1	Barley	plastid	59.8	60.26
GSMUA_Achr8P00260_001	Banana	mitochondrion	64.38	57.76
Bra036115.1-P	Field mustard	cytosol	46.56	56.66
Bra037682.1-P	Field mustard	plastid	53.44	53.98
Bra004781.1-P	Field mustard	plastid	53.69	53.28
Bra009985.1-P	Field mustard	cytosol	37.15	52.71
Bra036114.1-P	Field mustard	cytosol	45.55	52.34
Bra014529.1-P	Field mustard	plastid	52.67	49.05
Bra014436.1-P	Field mustard	mitochondrion	44.53	47.55
Bra007604.1-P	Field mustard	mitochondrion	44.27	47.28
Zm00001d043101_P001	Maize	plastid	23.16	46.91
Bra001131.1-P	Field mustard	mitochondrion	46.56	45.75
Bra020605.1-P	Field mustard	mitochondrion	45.04	40.78
Bra040417.1-P	Field mustard	cytosol	29.77	37.5
Bra038025.1-P	Field mustard	plastid	25.7	23.38

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	EnsemblPlantsGene:Bra036448	EnsemblPlants:Bra036448.1
EnsemblPlants:Bra036448.1-P	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579
GO:GO:0009628	GO:GO:0009643	GO:GO:0009987	GO:GO:0010310	GO:GO:0015979	GO:GO:0016740
GO:GO:0019344	GO:GO:0031977	GO:GO:0090322	UniProt:M4F5U2	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF90	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002540F27	SEG:seg	:	:

Description

AT3G03630 (E=6e-149) CS26 | CS26; cysteine synthase

Coordinates

chrA07:-:434438..436332

Molecular Weight (calculated)

41960.6 Da

IEP (calculated)

7.029

GRAVY (calculated)

-0.059

Length

393 amino acids

Sequence
(BLAST)

001: MALSSPSLLR LLPHHPFTLT TSKRHRFLSF NHEASSSSLV VAAVSSKPST GTKPKSKSKS KPPPPPPPAP VTTVAHEVGT EESETVNIAE DVTQLIGSTP
101: MVYLNRVTDG CVADVAAKLE SMEPCRSVKD RIGLSMINEA EDRGDITPRK SVLVEPTTGN TGLGIAFVAA AKGYKLIVTM PASINVERRM LLRALGAEIV
201: LTSPEKGLKG AVDKAKEIVL KTKNAYMFQQ FDNTANTKIH FETTGPEIWE DTLGNVDIFV AGIGTGGTVT GTGSFLKMMN NDIKIVGVEP SERSVISGDS
301: PGYVPGILDV KLLDEVFKVS NEEAIEMARR LALEEGLLVG ISSGAAAVAA ISLAKRAENT GKLITVLFPS HGERYITTAL FSSIHKEVQE MSH

Best Arabidopsis Sequence Match ( AT3G03630.1 )
(BLAST)

001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY

Arabidopsis Description

CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.