Factsheet for Zm00001d043101_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017793_P001
Zm00001d051589_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03630.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT3G03630.1	Zm00001d051589_P001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03791	Sorghum	plastid	93.3	47.14
TraesCS3D01G332100.1	Wheat	plastid	73.2	37.47
Os01t0814800-01	Rice	plastid	74.74	36.99
TraesCS3A01G338600.3	Wheat	plastid	72.16	36.94
TraesCS3B01G370200.3	Wheat	plastid	71.13	36.6
HORVU3Hr1G079890.1	Barley	plastid	71.65	35.64
VIT_08s0056g00820.t01	Wine grape	plastid	48.97	24.36
KRH64961	Soybean	nucleus, plastid	46.91	24.33
KRG94935	Soybean	nucleus	45.88	23.99
GSMUA_Achr8P00260_001	Banana	mitochondrion	53.09	23.52
Bra036448.1-P	Field mustard	plastid	46.91	23.16
CDY21176	Canola	plastid	46.91	23.16
CDY29946	Canola	plastid	46.39	22.96
AT3G03630.1	Thale cress	plastid	47.42	22.77
Zm00001d031136_P003	Maize	plasma membrane	36.6	21.85
Zm00001d008379_P001	Maize	plastid	39.18	19.1
Zm00001d045327_P001	Maize	cytosol, extracellular	34.02	19.08
Zm00001d003717_P001	Maize	cytosol	34.54	19.03
Zm00001d045340_P004	Maize	cytosol	34.02	18.64
Zm00001d040235_P005	Maize	plastid	37.63	18.43
Zm00001d004413_P002	Maize	mitochondrion	32.47	16.49
Zm00001d028220_P001	Maize	plastid	17.53	6.94
Zm00001d045350_P001	Maize	mitochondrion	5.15	4.76
Zm00001d045341_P003	Maize	mitochondrion	4.64	4.23
Zm00001d045344_P001	Maize	mitochondrion	4.64	4.23
Zm00001d045347_P001	Maize	mitochondrion	4.64	4.23

Protein Annotations

EnsemblPlants:Zm00001d043101_P001	EnsemblPlants:Zm00001d043101_T001	EnsemblPlantsGene:Zm00001d043101	Gene3D:3.40.50.1100	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314
PANTHER:PTHR10314:SF90	ProteinID:ONM37002.1	SEG:seg	SUPFAM:SSF53686	UniParc:UPI0008448471	UniProt:A0A1D6N8Y1
MapMan:50.2.5	:	:	:	:	:

Description

Probable S-sulfocysteine synthase chloroplastic

Coordinates

chr3:+:189202602..189205566

Molecular Weight (calculated)

20394.5 Da

IEP (calculated)

5.957

GRAVY (calculated)

0.175

Length

194 amino acids

Sequence
(BLAST)

001: MAMAPPPACS LFPRVAAAAP SSVTSNSVLT SRGPGILPSP RLAFARRHLS AAWSSKAAAS ASVEIQDDYT DEMDAVNIAQ DVTQVIGVEP AETSVISGDS
101: PGYIPSILDV QLIDEVVKVS TAEAVDSARE LALKEGLLVG ISSGAAAIAA INVGKRPENA GKLIAVIFPS FGERYISTIL FRPIYDSVRR MRKR

Best Arabidopsis Sequence Match ( AT3G03630.1 )
(BLAST)

001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY

Arabidopsis Description

CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.