CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05647

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03630.1	EES05647	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043101_P001	Maize	plastid	47.14	93.3
Os01t0814800-01	Rice	plastid	84.11	82.4
TraesCS3D01G332100.1	Wheat	plastid	81.25	82.32
TraesCS3A01G338600.3	Wheat	plastid	80.47	81.53
TraesCS3B01G370200.3	Wheat	plastid	79.43	80.9
HORVU3Hr1G079890.1	Barley	plastid	80.47	79.23
KRG94935	Soybean	nucleus	61.98	64.15
KRH64961	Soybean	nucleus, plastid	61.72	63.37
VIT_08s0056g00820.t01	Wine grape	plastid	63.28	62.31
KXG24064	Sorghum	cytosol	51.56	60.92
Bra036448.1-P	Field mustard	plastid	61.98	60.56
CDY21176	Canola	plastid	61.98	60.56
CDY29946	Canola	plastid	61.46	60.2
AT3G03630.1	Thale cress	plastid	62.76	59.65
GSMUA_Achr8P00260_001	Banana	mitochondrion	65.89	57.76
KXG26295	Sorghum	cytosol	48.7	53.43
EES02674	Sorghum	plastid	54.43	51.99
EES04772	Sorghum	cytosol	41.93	47.21
KXG19309	Sorghum	cytosol	42.19	46.82
EES11801	Sorghum	mitochondrion	46.88	46.63
KXG19307	Sorghum	cytosol	42.45	46.44
KXG19308	Sorghum	cytosol	41.93	46.13
OQU75833	Sorghum	cytosol	27.08	42.45
OQU75837	Sorghum	cytosol	27.86	40.38
EER95270	Sorghum	plastid	27.6	23.35

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	EntrezGene:8085383	UniProt:C5XN68
InterPro:CysK	InterPro:Cys_synth	EnsemblPlants:EES03791	ProteinID:EES03791	ProteinID:EES03791.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009643	GO:GO:0009987
GO:GO:0010310	GO:GO:0015979	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	GO:GO:0031977
GO:GO:0090322	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314
PANTHER:PTHR10314:SF90	MetaCyc:PWY-6936	EnsemblPlantsGene:SORBI_3003G333700	SUPFAM:SSF53686	unigene:Sbi.11103	SignalP:SignalP-noTM
TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0001A85795	RefSeq:XP_002458671.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:65743277..65746692

Molecular Weight (calculated)

40752.1 Da

IEP (calculated)

5.969

GRAVY (calculated)

0.068

Length

384 amino acids

Sequence
(BLAST)

001: MAMAPPPACS LFLRVAAAAP SSVTSSSVLT QRGSGLLPSP RPASPRRHLT AAWSSKAAAS ASVEIQDDYA DEMDAVNIAQ DVTQLIGKTP MVYLNSVADG
101: CVANIAAKLE YMGPCRSVKD RIGLSMINDA EEKGLISPDK TILVEPTTGN TGVAIAAVAA ARGYKLIATM PSSIDVERRV LLRAFGAEVV LTDPTKGLKG
201: AFDKAEEIVL RTPNAYMFQQ FNNEANSEIH FQTTGPEIWE DTLGSVDILV ASIGTGGTIT GTGRYLKRMN KDIKVIGVEP AETSVISGDN PGYIPSILDV
301: QLIDEVVKVS TAEAVDSARE LALKEGLLVG ISSGAAAIAA INVAKRPENA GKLIAVIFPS FGERYISSIL FRPIYDSVRR MRKR

Best Arabidopsis Sequence Match ( AT3G03630.1 )
(BLAST)

001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY

Arabidopsis Description

CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.