Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_14s0066g01280.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G03630.1 | VIT_14s0066g01280.t01 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94935 | Soybean | nucleus | 68.97 | 72.51 |
| KRH64961 | Soybean | nucleus, plastid | 69.49 | 72.46 |
| CDY29946 | Canola | plastid | 66.67 | 66.33 |
| Bra036448.1-P | Field mustard | plastid | 66.41 | 65.9 |
| CDY21176 | Canola | plastid | 66.41 | 65.9 |
| TraesCS3D01G332100.1 | Wheat | plastid | 63.33 | 65.17 |
| TraesCS3A01G338600.3 | Wheat | plastid | 63.08 | 64.91 |
| TraesCS3B01G370200.3 | Wheat | plastid | 62.31 | 64.46 |
| AT3G03630.1 | Thale cress | plastid | 65.64 | 63.37 |
| HORVU3Hr1G079890.1 | Barley | plastid | 63.33 | 63.33 |
| EES03791 | Sorghum | plastid | 62.31 | 63.28 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 51.79 | 62.54 |
| Os01t0814800-01 | Rice | plastid | 62.05 | 61.73 |
| GSMUA_Achr8P00260_001 | Banana | mitochondrion | 66.41 | 59.13 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 50.51 | 57.6 |
| VIT_05s0094g00780.t01 | Wine grape | plastid | 56.41 | 57.59 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 49.49 | 49.49 |
| Zm00001d043101_P001 | Maize | plastid | 24.36 | 48.97 |
| VIT_15s0046g02300.t01 | Wine grape | mitochondrion | 44.1 | 46.36 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 51.03 | 45.33 |
| VIT_04s0044g00250.t01 | Wine grape | mitochondrion | 39.49 | 42.9 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 54.1 | 30.1 |
| VIT_19s0015g00380.t01 | Wine grape | plastid | 26.67 | 24.7 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | EntrezGene:100267217 | wikigene:100267217 | Gene3D:3.40.50.1100 | MapMan:50.2.5 |
| ProteinID:CBI31185 | ProteinID:CBI31185.3 | InterPro:CysK | InterPro:Cys_synth | UniProt:D7TL13 | EMBL:FN595995 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009643 |
| GO:GO:0009987 | GO:GO:0010310 | GO:GO:0015979 | GO:GO:0016740 | GO:GO:0019344 | GO:GO:0030170 |
| GO:GO:0031977 | GO:GO:0090322 | EntrezGene:LOC100267217 | wikigene:LOC100267217 | InterPro:P-phosphate_BS | PFAM:PF00291 |
| InterPro:PLP-dep | ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF90 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 |
| TIGRFAMs:TIGR01139 | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI00015CB626 | ArrayExpress:VIT_08s0056g00820 | EnsemblPlantsGene:VIT_08s0056g00820 | EnsemblPlants:VIT_08s0056g00820.t01 |
| RefSeq:XP_002271966 | RefSeq:XP_002271966.2 | RefSeq:XP_010653156.1 | SEG:seg | : | : |
Description
Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:D7TL13]
Coordinates
chr8:+:1283274..1294277
Molecular Weight (calculated)
41837.8 Da
IEP (calculated)
9.185
GRAVY (calculated)
-0.008
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSGLLPHI HSFPSTYQPL RVAFRSPKSP FPNGGFATRL TVKAEAKAKA KAEAKAKAKA KTKTKTTSTA TATSVFEDIH TVNIADDVTQ LIGRTPMIYL
101: NKVTQGCVAN IAAKLESMEP CRSVKDRIGY SMISDAEETG AISPGRSILV EPTSGNTGLG IAFVAATKGY KLIVTMPASI DIERRILLRA FGAEIVLTDP
201: MKGIKGAVDK AEEIVQSMPN AYMFQQFDNM ANAKIHFETT GPEIWEDTVG SVDIFVAGIG TGGTVTGTGR YLKMMKRDIK VVGVEPADRS VISGDNPGYV
301: PSILDVKLLD EVLKVTNDEA VEMARKLALE EGLLVGISSG AAAAAAISIA KRPENAGKLI AVVFPSFGER YIPTILFHSI HEEVRKMEHR
101: NKVTQGCVAN IAAKLESMEP CRSVKDRIGY SMISDAEETG AISPGRSILV EPTSGNTGLG IAFVAATKGY KLIVTMPASI DIERRILLRA FGAEIVLTDP
201: MKGIKGAVDK AEEIVQSMPN AYMFQQFDNM ANAKIHFETT GPEIWEDTVG SVDIFVAGIG TGGTVTGTGR YLKMMKRDIK VVGVEPADRS VISGDNPGYV
301: PSILDVKLLD EVLKVTNDEA VEMARKLALE EGLLVGISSG AAAAAAISIA KRPENAGKLI AVVFPSFGER YIPTILFHSI HEEVRKMEHR
001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY
Arabidopsis Description
CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.