Factsheet for VIT_14s0030g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68699	Soybean	cytosol	41.65	89.85
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	41.37	89.23
GSMUA_Achr4P21350_001	Banana	cytosol	39.8	85.85
GSMUA_Achr11P...	Banana	cytosol	39.52	85.49
KXG24064	Sorghum	cytosol	39.52	85.23
Zm00001d031136_P003	Maize	plasma membrane	39.37	84.92
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	39.23	84.62
GSMUA_Achr9P25760_001	Banana	cytosol	39.09	84.57
TraesCS5D01G027600.1	Wheat	cytosol, golgi	38.66	83.38
HORVU3Hr1G040910.1	Barley	mitochondrion	3.99	82.35
Os12t0625000-01	Rice	plasma membrane	39.66	80.12
VIT_14s0030g01520.t01	Wine grape	cytosol	36.66	79.57
VIT_14s0030g01550.t01	Wine grape	cytosol	36.66	75.15
TraesCS2A01G300600.1	Wheat	cytosol	34.81	74.62
TraesCS2B01G316800.1	Wheat	cytosol	34.81	74.62
HORVU2Hr1G074630.2	Barley	cytosol	30.1	72.76
KXG26295	Sorghum	cytosol	33.81	67.71
TraesCS2D01G298600.2	Wheat	cytosol	34.52	67.6
Zm00001d003717_P001	Maize	cytosol	33.52	66.76
HORVU5Hr1G015070.1	Barley	extracellular	6.42	66.18
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	36.66	65.9
TraesCS5A01G022200.1	Wheat	plastid	39.8	65.19
VIT_05s0094g00780.t01	Wine grape	plastid	34.81	63.87
TraesCS5B01G018700.3	Wheat	plastid	39.8	63.55
HORVU5Hr1G005980.2	Barley	plastid	39.23	62.93
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	15.55	58.29
VIT_14s0030g01490.t01	Wine grape	cytosol	36.38	58.09
VIT_08s0056g00820.t01	Wine grape	plastid	30.1	54.1
VIT_15s0046g02300.t01	Wine grape	mitochondrion	28.53	53.91
VIT_04s0044g00250.t01	Wine grape	mitochondrion	26.68	52.09
HORVU1Hr1G031220.3	Barley	plastid	21.68	37.35
VIT_19s0015g00380.t01	Wine grape	plastid	15.26	25.42

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100241908	wikigene:100241908	EntrezGene:100264196	wikigene:100264196
Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	EMBL:AM425401	ProteinID:CAN75607	ProteinID:CAN75607.1	ProteinID:CCB58109
ProteinID:CCB58109.1	InterPro:CysK	InterPro:Cys_synth	UniProt:F6HTU8	EMBL:FN596249	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170
EntrezGene:LOC100241908	wikigene:LOC100241908	EntrezGene:LOC100264196	wikigene:LOC100264196	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	TMHMM:TMhelix	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002109B98	ArrayExpress:VIT_14s0030g01560	EnsemblPlantsGene:VIT_14s0030g01560
EnsemblPlants:VIT_14s0030g01560.t01	RefSeq:XP_002275940	RefSeq:XP_002275940.1	RefSeq:XP_002275990	RefSeq:XP_002275990.1	RefSeq:XP_003633658
RefSeq:XP_003633658.1	RefSeq:XP_003633672	RefSeq:XP_003633672.1	SEG:seg	:	:

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6HTU8]

Coordinates

chr14:-:6246203..6268024

Molecular Weight (calculated)

75285.6 Da

IEP (calculated)

8.888

GRAVY (calculated)

0.077

Length

701 amino acids

Sequence
(BLAST)

001: MIQKKSELIL IYNIKLGNLI LNLILFVRFI QEKQFAILPS LFIKVVSVET VGDVQKPQNR KKKQRIRKGD LVVGISGDLC EMAEEKCFIA KDVTELIGKT
101: PLVYLNNVVD GCVARIAAKL EMMEPCSSVK DRIGYSMITD AEEKGLITPG ESVLIEPTSG NTGIGLAFMA AAKGYKLIIT MPASMSLERR IILRAFGAEL
201: VLTDPAKGMK GAVQKAEEIL AKTPNSYILQ QFENPANPKI HYETTGPEIW RGTGGKVDAF VSGIGTGGTI TGAGKFLKEQ NSDIKLYGVE PVESAVLSGG
301: KPGPHKIQGI GAGFIPGVLD VNLLDEVVQV SSEEAIETAK LLALKEGLLV GISSGGAAAA AIKLAKRPEN AGKLIVVVFP SFGERYLSSV LFDSVKREAE
401: NMLKKKHGGQ MLDCKRCYRT SIAVKLEAME PCSSVKDRIA LSMIKDVEDK GLIQLGKTVL IEPTSGNSGI ELAYIAAVKG YKLILAMPAS MSRERRIVLR
501: AFGDELHLTD PVKGIKGIHE KAELLEKTPY GYMLKQFANP ANPKIHYETT GTEIWRGCGG KVDVFVSGVG TGGTVTGVGR FLKEKNPDIK VYGVEPAESA
601: VLNGGEPGLH KIQGIDPGFI TPILDVSILD EVVPISSEEA IETAKLLALK EGLLVGKPSG VAAAAAIKIA KRPENAGKLI VVVFPSFGER YLSTVLFDSI
701: R

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.