Factsheet for VIT_14s0030g01540.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01520.t01	Wine grape	cytosol	63.08	76.16
GSMUA_Achr9P25760_001	Banana	cytosol	62.05	74.69
GSMUA_Achr11P...	Banana	cytosol	61.79	74.38
GSMUA_Achr4P21350_001	Banana	cytosol	61.79	74.15
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	61.54	73.85
HORVU3Hr1G040910.1	Barley	mitochondrion	6.41	73.53
TraesCS5D01G027600.1	Wheat	cytosol, golgi	60.51	72.62
Zm00001d031136_P003	Maize	plasma membrane	60.0	72.0
VIT_14s0030g01550.t01	Wine grape	cytosol	63.08	71.93
KXG24064	Sorghum	cytosol	59.74	71.69
Os12t0625000-01	Rice	plasma membrane	60.77	68.3
TraesCS2A01G300600.1	Wheat	cytosol	56.92	67.89
TraesCS2B01G316800.1	Wheat	cytosol	56.92	67.89
HORVU2Hr1G074630.2	Barley	cytosol	48.46	65.17
TraesCS2D01G298600.2	Wheat	cytosol	57.18	62.29
Zm00001d003717_P001	Maize	cytosol	55.64	61.65
KXG26295	Sorghum	cytosol	54.62	60.86
VIT_05s0094g00780.t01	Wine grape	plastid	58.97	60.21
HORVU5Hr1G015070.1	Barley	extracellular	10.0	57.35
TraesCS5A01G022200.1	Wheat	plastid	61.28	55.84
VIT_14s0030g01490.t01	Wine grape	cytosol	62.31	55.35
HORVU5Hr1G005980.2	Barley	plastid	61.54	54.92
TraesCS5B01G018700.3	Wheat	plastid	61.79	54.9
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	24.62	51.34
VIT_15s0046g02300.t01	Wine grape	mitochondrion	47.95	50.4
VIT_08s0056g00820.t01	Wine grape	plastid	49.49	49.49
VIT_04s0044g00250.t01	Wine grape	mitochondrion	44.36	48.19
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	65.9	36.66
HORVU1Hr1G031220.3	Barley	plastid	34.36	32.92
VIT_19s0015g00380.t01	Wine grape	plastid	27.18	25.18

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100252170	wikigene:100252170	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2
ProteinID:CCB58111	ProteinID:CCB58111.1	InterPro:CysK	InterPro:Cys_synth	UniProt:F6HTV0	EMBL:FN596249
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	EntrezGene:LOC100252170
wikigene:LOC100252170	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314
PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002109B9A
ArrayExpress:VIT_14s0030g01540	EnsemblPlantsGene:VIT_14s0030g01540	EnsemblPlants:VIT_14s0030g01540.t01	RefSeq:XP_002275688	RefSeq:XP_002275688.2	SEG:seg

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6HTV0]

Coordinates

chr14:-:6231170..6240389

Molecular Weight (calculated)

42517.1 Da

IEP (calculated)

9.102

GRAVY (calculated)

0.055

Length

390 amino acids

Sequence
(BLAST)

001: MFLEELLIKC FFKKYYKRGC KSFSEKCFGI ISCKSWFELK LVIQRSTSID LKPRHVFQDR QLIGKTPMVY LNKIVDGCVA RIAAKLEMME PCSSVKDRIG
101: YSMIKDAEDK GLITPGKTVL IEPTSGNTGI GLAFIAAVKG YKLVIVMPAS FSLERRIILR AFGAELIITD PAKGFKEQLR RIEELLKKIP NGYVLQQFEN
201: PANPRIHYET TGPEIWEGSG GKVDALVSGI GTGGTASGAG KFLKEKNPEI KVYGVEPVES AVLSGGEHAP HKIQGIGAGF IPAVLNVSIL DEVIQISSDE
301: AIDTARALAL KEGLLVGISS GAAAAAAIKI AKRAENAGKL IVVVFPSFGE RYLSTALFDS LRHEAENMVF ERAETVVMPN PIATMHPTQR

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.