Factsheet for VIT_14s0030g01490.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0014g03380.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	VIT_19s0014g03380.t01	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01520.t01	Wine grape	cytosol	72.67	98.76
VIT_14s0030g01550.t01	Wine grape	cytosol	64.46	82.75
GSMUA_Achr9P25760_001	Banana	cytosol	56.04	75.93
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	56.04	75.69
KRH34052	Soybean	cytosol	55.81	75.62
KRG92757	Soybean	cytosol	55.58	75.54
KRH13764	Soybean	cytosol	55.13	75.39
GSMUA_Achr11P...	Banana	cytosol	55.35	75.0
GSMUA_Achr4P21350_001	Banana	cytosol	55.35	74.77
KRH34037	Soybean	cytosol	54.44	73.99
KXG24064	Sorghum	cytosol	54.67	73.85
Zm00001d031136_P003	Maize	plasma membrane	54.67	73.85
TraesCS5D01G027600.1	Wheat	cytosol, golgi	54.44	73.54
Solyc01g097950.2.1	Tomato	cytosol	53.53	72.76
CDY69239	Canola	cytosol	52.39	71.65
CDX74160	Canola	cytosol	51.71	70.72
AT3G04940.1	Thale cress	cytosol	52.16	70.68
AT5G28020.1	Thale cress	cytosol	51.94	70.59
CDY52498	Canola	cytosol	51.94	70.59
CDY05586	Canola	cytosol	51.94	70.59
CDY50768	Canola	cytosol	51.48	70.41
Solyc01g097930.2.1	Tomato	cytosol	51.71	70.28
CDY41911	Canola	cytosol	51.25	70.09
Bra036115.1-P	Field mustard	cytosol	51.25	69.66
KRH43690	Soybean	cytosol	36.9	69.53
CDY00007	Canola	cytosol	51.03	69.35
Solyc01g097920.2.1	Tomato	cytosol, plastid	56.04	69.1
AT5G28030.2	Thale cress	cytosol	50.8	69.04
CDY41913	Canola	cytosol	47.61	68.75
CDY19703	Canola	cytosol	50.57	68.73
Os12t0625000-01	Rice	plasma membrane	53.99	68.3
TraesCS2B01G316800.1	Wheat	cytosol	50.8	68.2
TraesCS2A01G300600.1	Wheat	cytosol	50.57	67.89
Solyc01g097940.1.1	Tomato	plasma membrane	30.3	67.86
CDX86187	Canola	cytosol	46.47	67.11
Bra009985.1-P	Field mustard	cytosol	42.14	66.79
CDX80680	Canola	cytosol	46.24	66.78
HORVU2Hr1G074630.2	Barley	cytosol	43.96	66.55
CDY19702	Canola	mitochondrion	51.25	64.1
CDY00008	Canola	mitochondrion	50.8	63.53
Bra036114.1-P	Field mustard	cytosol	49.2	63.16
TraesCS2D01G298600.2	Wheat	cytosol	51.25	62.85
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	55.35	62.31
KXG26295	Sorghum	cytosol	49.43	62.0
Zm00001d003717_P001	Maize	cytosol	49.2	61.36
KRG92761	Soybean	cytosol	44.87	59.52
VIT_05s0094g00780.t01	Wine grape	plastid	51.48	59.16
Bra001131.1-P	Field mustard	mitochondrion	52.62	57.75
CDY41915	Canola	cytosol	7.97	56.45
HORVU3Hr1G040910.1	Barley	mitochondrion	4.33	55.88
TraesCS5A01G022200.1	Wheat	plastid	53.99	55.37
TraesCS5B01G018700.3	Wheat	plastid	54.44	54.44
HORVU5Hr1G005980.2	Barley	plastid	53.99	54.23
VIT_15s0046g02300.t01	Wine grape	mitochondrion	43.28	51.21
VIT_08s0056g00820.t01	Wine grape	plastid	45.33	51.03
Bra020605.1-P	Field mustard	mitochondrion	50.34	50.92
VIT_04s0044g00250.t01	Wine grape	mitochondrion	39.86	48.75
Bra040417.1-P	Field mustard	cytosol	33.94	47.76
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	20.05	47.06
HORVU5Hr1G015070.1	Barley	extracellular	7.29	47.06
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	58.09	36.38
HORVU1Hr1G031220.3	Barley	plastid	29.39	31.7
VIT_19s0015g00380.t01	Wine grape	plastid	25.28	26.37

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100854746	wikigene:100854746	Gene3D:3.40.50.1100	MapMan:50.2.5
ProteinID:CCB58114	ProteinID:CCB58114.1	InterPro:CysK	InterPro:Cys_synth	UniProt:F6HTV3	EMBL:FN596249
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	EntrezGene:LOC100854746
wikigene:LOC100854746	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314
PANTHER:PTHR10314:SF97	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002109B9D
ArrayExpress:VIT_14s0030g01490	EnsemblPlantsGene:VIT_14s0030g01490	EnsemblPlants:VIT_14s0030g01490.t01	RefSeq:XP_003633660	RefSeq:XP_003633660.1	SEG:seg

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6HTV3]

Coordinates

chr14:+:6093050..6110818

Molecular Weight (calculated)

46539.7 Da

IEP (calculated)

4.520

GRAVY (calculated)

0.172

Length

439 amino acids

Sequence
(BLAST)

001: MEEKCAIAKD VTELIGNTPM VYLNNVVDGC VAHIAAKLEM MEPCSSVKDR IGYSMINDAE EKGLITPGKT VLIEPTSGNT GIGLAFIAAA KGYKLILVMP
101: SVVTLERKIP SFEMSFMEEK CAIAKDVTEL IGNTPMVYLN NVVDGCVAHI AAKLEMMEPC SSVKDRIGYS MINDAEEKGL ITPGKTVLIE PTSGNTGIGL
201: AFIAAAKGYK LILVMPSVVT LERKMVVLAF GAELYLTDIA KGIQGVFDKA DEILQNTPNG YILNQFENPA NPKIHYETTG PEIWKGTGGK VDILVAGIGT
301: GGTVTGAGHF LKEKNPEIKV YGIEPAESAV LNGGNPGSHK IQGIGAGIIP QVLDTELLDE VIQISSDEAI ETAGLLALKE GLLVGISSGA AAAAAIKLAE
401: SPENAGKLIT VIFPSFGERY LSSVLFDSIR DEAENMKFD

Best Arabidopsis Sequence Match ( AT4G14880.1 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.