CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036115.1-P	Field mustard	cytosol	92.02	100.0
CDY00008	Canola	mitochondrion	98.58	98.58
AT5G28030.2	Thale cress	cytosol	82.91	90.09
CDX80680	Canola	cytosol	75.21	86.84
CDX86187	Canola	cytosol	75.21	86.84
CDY52498	Canola	cytosol	79.77	86.69
CDY05586	Canola	cytosol	79.49	86.38
CDY00007	Canola	cytosol	77.49	84.21
CDY19703	Canola	cytosol	76.92	83.59
CDY69239	Canola	cytosol	72.36	79.13
CDX74160	Canola	cytosol	72.08	78.82
CDY41913	Canola	cytosol	66.67	76.97
CDY50768	Canola	cytosol	68.66	75.08
CDY41911	Canola	cytosol	68.66	75.08
KRH13764	Soybean	cytosol	66.67	72.9
VIT_14s0030g01520.t01	Wine grape	cytosol	64.67	70.28
KRH34037	Soybean	cytosol	64.39	69.97
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	64.39	69.54
KRG92757	Soybean	cytosol	63.82	69.35
KRH34052	Soybean	cytosol	63.82	69.14
KRH43690	Soybean	cytosol	45.01	67.81
VIT_14s0030g01550.t01	Wine grape	cytosol	65.53	67.25
KXG24064	Sorghum	cytosol	62.11	67.08
Zm00001d031136_P003	Maize	plasma membrane	62.11	67.08
TraesCS5D01G027600.1	Wheat	cytosol, golgi	61.82	66.77
GSMUA_Achr11P...	Banana	cytosol	61.54	66.67
GSMUA_Achr4P21350_001	Banana	cytosol	61.54	66.46
Solyc01g097940.1.1	Tomato	plasma membrane	36.75	65.82
CDY29778	Canola	cytosol, peroxisome, plastid	56.7	65.68
GSMUA_Achr9P25760_001	Banana	cytosol	60.4	65.43
Solyc01g097950.2.1	Tomato	cytosol	60.11	65.33
Solyc01g097930.2.1	Tomato	cytosol	59.83	65.02
CDY42795	Canola	cytosol	59.54	64.91
CDY68436	Canola	cytosol	59.54	64.91
HORVU3Hr1G040910.1	Barley	mitochondrion	6.27	64.71
CDY09039	Canola	cytosol	56.98	64.1
TraesCS2B01G316800.1	Wheat	cytosol	58.12	62.39
TraesCS2A01G300600.1	Wheat	cytosol	57.83	62.08
Solyc01g097920.2.1	Tomato	cytosol, plastid	62.96	62.08
Os12t0625000-01	Rice	plasma membrane	60.68	61.38
HORVU2Hr1G074630.2	Barley	cytosol	49.29	59.66
KXG26295	Sorghum	cytosol	57.55	57.71
Zm00001d003717_P001	Maize	cytosol	57.27	57.1
TraesCS2D01G298600.2	Wheat	cytosol	58.12	56.98
CDY41915	Canola	cytosol	9.97	56.45
KRG92761	Soybean	cytosol	52.71	55.89
CDY23400	Canola	plastid	61.54	55.53
CDY30438	Canola	plastid	61.25	55.27
CDY17914	Canola	plastid	61.25	54.85
CDX79804	Canola	plastid	61.25	54.29
HORVU5Hr1G015070.1	Barley	extracellular	10.26	52.94
VIT_14s0030g01490.t01	Wine grape	cytosol	64.1	51.25
TraesCS5A01G022200.1	Wheat	plastid	61.82	50.7
CDY45790	Canola	plastid	61.25	50.35
CDX89032	Canola	plastid	61.54	50.35
HORVU5Hr1G005980.2	Barley	plastid	62.39	50.11
TraesCS5B01G018700.3	Wheat	plastid	62.68	50.11
CDY43932	Canola	mitochondrion	50.43	48.1
CDX89116	Canola	mitochondrion	50.14	47.83
CDX71737	Canola	mitochondrion	50.14	47.83
CDY29946	Canola	plastid	52.71	47.19
CDY48919	Canola	endoplasmic reticulum	42.17	46.98
CDY21176	Canola	plastid	52.14	46.56
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	22.79	42.78
CDY68838	Canola	mitochondrion	12.82	33.09
HORVU1Hr1G031220.3	Barley	plastid	34.19	29.48
CDY52906	Canola	plastid	29.34	23.84
CDY53756	Canola	endoplasmic reticulum	29.63	23.74

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078G3W9	UniProt:A0A078G3W9
EnsemblPlants:CDY19702	ProteinID:CDY19702	ProteinID:CDY19702.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00009433001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EE3292
SEG:seg	:	:	:	:	:

Description

BnaA09g03550DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078G3W9]

Coordinates

chrLK032100:+:3746..6171

Molecular Weight (calculated)

37881.2 Da

IEP (calculated)

5.776

GRAVY (calculated)

0.037

Length

351 amino acids

Sequence
(BLAST)

001: MFIVAFKELR ACYVLCYSRN NEFSRQTRME DRYMIKNDVT ELIGNTPMVY LNKIVDGCVA RIAAKLEMME PCSSIKDRIA YSMIKDAEDK GLITPGKSTL
101: IEATGGNTGI GLASIGAARG YRVILLMPST MSLERRIILR ALGAELHLTD MNIGIKGMLE KAEEILSKTP GGYIPHQFLN PENPEIHYRT TGPEIWRDSA
201: GEVDILVAGA GTGGTVSGTG RFLKKMNKNI KVCVVEPTES AVLSGGEPGP HLIQGIGPGV IPTNLDLSIV DEVIQVTSEE AIETAKLLAL KEGLLVGISS
301: GAAAAAALKV AKRPENAGKL IVVIFPSGGE RYLSTELFES VRYEAEHLSI D

Best Arabidopsis Sequence Match ( AT5G28030.1 )
(BLAST)

001: MEDRVLIKND VTELIGNTPM VYLNKIVDGC VARIAAKLEM MEPCSSIKDR IAYSMIKDAE DKGLITPGKS TLIEATGGNT GIGLASIGAS RGYKVILLMP
101: STMSLERRII LRALGAEVHL TDISIGIKGQ LEKAKEILSK TPGGYIPHQF INPENPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTVTG TGKFLKEKNK
201: DIKVCVVEPS ESAVLSGGKP GPHLIQGIGS GEIPANLDLS IVDEIIQVTG EEAIETTKLL AIKEGLLVGI SSGASAAAAL KVAKRPENVG KLIVVIFPSG
301: GERYLSTELF ESVRYEAENL PVE

Arabidopsis Description

DES1Bifunctional cystathionine gamma-lyase/cysteine synthase [Source:UniProtKB/Swiss-Prot;Acc:F4K5T2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.