CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50768	Canola	cytosol	99.38	99.38
CDY69239	Canola	cytosol	84.74	84.74
CDX74160	Canola	cytosol	84.42	84.42
CDY41913	Canola	cytosol	74.77	78.95
CDY05586	Canola	cytosol	76.64	76.16
CDY52498	Canola	cytosol	76.64	76.16
CDX86187	Canola	cytosol	71.34	75.33
CDX80680	Canola	cytosol	71.03	75.0
CDY00007	Canola	cytosol	75.39	74.92
CDY19703	Canola	cytosol	74.77	74.3
KRG92757	Soybean	cytosol	73.21	72.76
KRH13764	Soybean	cytosol	71.96	71.96
KRH34052	Soybean	cytosol	72.59	71.91
KRH34037	Soybean	cytosol	71.34	70.9
VIT_14s0030g01520.t01	Wine grape	cytosol	70.72	70.28
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	70.41	69.54
GSMUA_Achr11P...	Banana	cytosol	69.78	69.14
CDY29778	Canola	cytosol, peroxisome, plastid	65.11	68.98
CDY68436	Canola	cytosol	69.16	68.94
CDY19702	Canola	mitochondrion	75.08	68.66
CDY42795	Canola	cytosol	68.85	68.63
GSMUA_Achr9P25760_001	Banana	cytosol	68.54	67.9
Solyc01g097940.1.1	Tomato	plasma membrane	41.43	67.86
CDY00008	Canola	mitochondrion	74.14	67.81
HORVU3Hr1G040910.1	Barley	mitochondrion	7.17	67.65
Zm00001d031136_P003	Maize	plasma membrane	68.22	67.38
KXG24064	Sorghum	cytosol	68.22	67.38
GSMUA_Achr4P21350_001	Banana	cytosol	68.22	67.38
CDY09039	Canola	cytosol	65.42	67.31
Solyc01g097950.2.1	Tomato	cytosol	67.6	67.18
TraesCS5D01G027600.1	Wheat	cytosol, golgi	67.91	67.08
CDY41915	Canola	cytosol	12.77	66.13
KRH43690	Soybean	cytosol	47.98	66.09
Solyc01g097930.2.1	Tomato	cytosol	64.8	64.4
VIT_14s0030g01550.t01	Wine grape	cytosol	68.54	64.33
TraesCS2A01G300600.1	Wheat	cytosol	63.86	62.69
TraesCS2B01G316800.1	Wheat	cytosol	63.86	62.69
Solyc01g097920.2.1	Tomato	cytosol, plastid	69.47	62.64
Os12t0625000-01	Rice	plasma membrane	67.6	62.54
HORVU2Hr1G074630.2	Barley	cytosol	54.21	60.0
KXG26295	Sorghum	cytosol	63.55	58.29
Zm00001d003717_P001	Maize	cytosol	63.24	57.67
KRG92761	Soybean	cytosol	59.19	57.4
TraesCS2D01G298600.2	Wheat	cytosol	63.86	57.26
CDY23400	Canola	plastid	68.54	56.56
CDY30438	Canola	plastid	68.22	56.3
CDY17914	Canola	plastid	68.22	55.87
CDX79804	Canola	plastid	68.54	55.56
HORVU5Hr1G015070.1	Barley	extracellular	11.53	54.41
VIT_14s0030g01490.t01	Wine grape	cytosol	70.09	51.25
CDY45790	Canola	plastid	67.91	51.05
CDX89032	Canola	plastid	68.22	51.05
TraesCS5A01G022200.1	Wheat	plastid	67.29	50.47
TraesCS5B01G018700.3	Wheat	plastid	68.22	49.89
HORVU5Hr1G005980.2	Barley	plastid	67.6	49.66
CDX71737	Canola	mitochondrion	55.76	48.64
CDX89116	Canola	mitochondrion	55.45	48.37
CDY43932	Canola	mitochondrion	55.14	48.1
CDY48919	Canola	endoplasmic reticulum	46.42	47.3
CDY29946	Canola	plastid	57.01	46.68
CDY21176	Canola	plastid	56.7	46.31
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	25.55	43.85
CDY68838	Canola	mitochondrion	14.64	34.56
HORVU1Hr1G031220.3	Barley	plastid	36.45	28.75
CDY52906	Canola	plastid	32.4	24.07
CDY53756	Canola	endoplasmic reticulum	32.71	23.97

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078HVZ2	UniProt:A0A078HVZ2
EnsemblPlants:CDY41911	ProteinID:CDY41911	ProteinID:CDY41911.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00073891001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EDFB2B
SEG:seg	:	:	:	:	:

Description

BnaC05g46930DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078HVZ2]

Coordinates

chrLK032510:+:102453..105076

Molecular Weight (calculated)

33882.3 Da

IEP (calculated)

4.862

GRAVY (calculated)

0.125

Length

321 amino acids

Sequence
(BLAST)

001: MEYSIKDDVT QLIGNTPMVY LNNIVDGCVA RIAAKLEMMQ PCSSVKDRIA YGMIKDAEDK GLISPGKNIL IEPTSGNTGI GIAMVGAARG YKVVITMPAS
101: VSIERRIILL ALGAELHLTD PSKGVIGVIV KAEEILSKTP DGFMLEQFRN PSNPQSHYET TGPEIWRDCA EKVDMLVVGV GTGGTISGAG KFLKEKNKDF
201: KVYGVEPAES AVLSGGQPGP HGIQGIGAGL IPDNLDFSVL DEVIQVTSVE AIETAKLLAL KEGLLVGISS GAAAAAAIKV AKRPENAGKL IVVVFPSGGE
301: RYLSTPMFDS IRCEAENLAI E

Best Arabidopsis Sequence Match ( AT3G04940.2 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.