CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29778	Canola	cytosol, peroxisome, plastid	94.87	97.69
CDY68436	Canola	cytosol	98.08	95.03
CDY42795	Canola	cytosol	96.47	93.48
AT4G14880.5	Thale cress	cytosol	95.19	92.24
PGSC0003DMT400082113	Potato	cytosol	84.29	80.92
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	83.97	80.62
KRH27640	Soybean	cytosol	82.37	79.08
KRH77854	Soybean	cytosol	18.59	78.38
Zm00001d031136_P003	Maize	plasma membrane	80.77	77.54
KXG24064	Sorghum	cytosol	80.77	77.54
TraesCS5D01G027600.1	Wheat	cytosol, golgi	80.45	77.23
HORVU3Hr1G040910.1	Barley	mitochondrion	8.33	76.47
KRG91325	Soybean	cytosol, mitochondrion, nucleus	78.85	75.69
GSMUA_Achr9P25760_001	Banana	cytosol	78.21	75.31
GSMUA_Achr4P21350_001	Banana	cytosol	78.21	75.08
GSMUA_Achr11P...	Banana	cytosol	77.56	74.69
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	76.92	73.85
Os12t0625000-01	Rice	plasma membrane	77.88	70.03
KRH35519	Soybean	cytosol	67.95	69.51
CDX86187	Canola	cytosol	64.1	65.79
CDY41911	Canola	cytosol	67.31	65.42
CDY69239	Canola	cytosol	66.99	65.11
CDY50768	Canola	cytosol	66.99	65.11
CDX80680	Canola	cytosol	63.14	64.8
TraesCS2B01G316800.1	Wheat	cytosol	67.63	64.53
CDX74160	Canola	cytosol	66.03	64.17
TraesCS2A01G300600.1	Wheat	cytosol	66.67	63.61
HORVU5Hr1G015070.1	Barley	extracellular	13.78	63.24
CDY52498	Canola	cytosol	65.06	62.85
CDY00007	Canola	cytosol	65.06	62.85
HORVU2Hr1G074630.2	Barley	cytosol	58.33	62.76
CDY19703	Canola	cytosol	64.42	62.23
CDY05586	Canola	cytosol	64.42	62.23
CDY41913	Canola	cytosol	60.58	62.17
KXG26295	Sorghum	cytosol	66.67	59.43
TraesCS2D01G298600.2	Wheat	cytosol	67.63	58.94
TraesCS5A01G022200.1	Wheat	plastid	80.13	58.41
Zm00001d003717_P001	Maize	cytosol	65.06	57.67
CDY00008	Canola	mitochondrion	64.42	57.27
HORVU5Hr1G005980.2	Barley	plastid	80.13	57.21
CDY19702	Canola	mitochondrion	64.1	56.98
TraesCS5B01G018700.3	Wheat	plastid	80.13	56.95
CDY30438	Canola	plastid	70.51	56.56
CDY23400	Canola	plastid	70.19	56.3
CDY17914	Canola	plastid	70.19	55.87
CDX79804	Canola	plastid	70.19	55.3
CDY45790	Canola	plastid	69.55	50.82
CDX89116	Canola	mitochondrion	59.94	50.82
CDX89032	Canola	plastid	69.55	50.58
CDY43932	Canola	mitochondrion	59.62	50.54
CDX71737	Canola	mitochondrion	59.62	50.54
CDY48919	Canola	endoplasmic reticulum	50.0	49.52
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	28.85	48.13
CDY29946	Canola	plastid	60.26	47.96
CDY21176	Canola	plastid	59.94	47.58
CDY41915	Canola	cytosol	8.97	45.16
CDY68838	Canola	mitochondrion	15.06	34.56
HORVU1Hr1G031220.3	Barley	plastid	40.71	31.2
CDY53756	Canola	endoplasmic reticulum	31.41	22.37
CDY52906	Canola	plastid	30.77	22.22

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078F7N9	UniProt:A0A078F7N9
EnsemblPlants:CDY09039	ProteinID:CDY09039	ProteinID:CDY09039.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00001182001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EDE7DB
SEG:seg	:	:	:	:	:

Description

BnaC08g09930DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078F7N9]

Coordinates

chrLK031992:-:10751..13094

Molecular Weight (calculated)

33146.5 Da

IEP (calculated)

5.517

GRAVY (calculated)

0.109

Length

312 amino acids

Sequence
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSVERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTD GKIDGFYLKE QNPNVKLYGV EPIESAILSG
201: GKPGPHKIQG IGAGFIPSVL EVDLIDEVVQ VSSDESIDMA RLLALKEGLL VGISSGAAAA AAIKLAKRPE NAGKLFVAVF PSFGERYLST VLFDATRKEA
301: ESMTFQACIV SP

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.