CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037682.1-P	Field mustard	plastid	98.97	98.97
CDY30438	Canola	plastid	98.71	98.71
CDY17914	Canola	plastid	93.32	92.6
CDX79804	Canola	plastid	93.57	91.92
AT2G43750.1	Thale cress	plastid	92.29	91.58
VIT_05s0094g00780.t01	Wine grape	plastid	75.32	76.7
Solyc08g014340.2.1	Tomato	plastid	75.32	75.91
PGSC0003DMT400059624	Potato	cytosol, plastid	75.06	75.65
KRH50190	Soybean	nucleus, plastid	75.32	75.32
GSMUA_Achr5P17120_001	Banana	plastid	72.49	73.44
KRH71273	Soybean	nucleus, plastid	74.04	73.1
GSMUA_Achr9P02430_001	Banana	plastid	71.21	72.89
CDY45790	Canola	plastid	79.95	72.83
CDX89032	Canola	plastid	80.21	72.73
CDY68436	Canola	cytosol	59.64	72.05
TraesCS3B01G102500.1	Wheat	golgi, plastid	72.24	71.68
Os01t0978100-01	Rice	plastid	72.49	71.57
TraesCS3A01G087100.1	Wheat	plastid	71.47	71.47
CDY42795	Canola	cytosol	59.13	71.43
CDY29778	Canola	cytosol, peroxisome, plastid	55.53	71.29
TraesCS3D01G087300.1	Wheat	plastid	71.72	71.17
Zm00001d040235_P005	Maize	plastid	71.72	70.45
CDY09039	Canola	cytosol	56.3	70.19
EES02674	Sorghum	plastid	72.49	70.15
Zm00001d008379_P001	Maize	plastid	71.47	69.85
CDY69239	Canola	cytosol	56.81	68.85
CDY41911	Canola	cytosol	56.56	68.54
CDY50768	Canola	cytosol	56.56	68.54
CDX74160	Canola	cytosol	56.3	68.22
CDY41913	Canola	cytosol	52.7	67.43
CDY00007	Canola	cytosol	55.53	66.87
CDY52498	Canola	cytosol	55.27	66.56
CDY19703	Canola	cytosol	55.27	66.56
CDY05586	Canola	cytosol	54.76	65.94
CDX86187	Canola	cytosol	50.13	64.14
CDX80680	Canola	cytosol	49.87	63.82
CDY19702	Canola	mitochondrion	55.53	61.54
CDY00008	Canola	mitochondrion	55.27	61.25
CDY29946	Canola	plastid	54.24	53.83
CDY21176	Canola	plastid	53.98	53.44
CDX89116	Canola	mitochondrion	49.1	51.9
CDY43932	Canola	mitochondrion	48.84	51.63
CDX71737	Canola	mitochondrion	48.84	51.63
CDY41915	Canola	cytosol	8.23	51.61
CDY48919	Canola	endoplasmic reticulum	41.13	50.79
CDY68838	Canola	mitochondrion	11.57	33.09
CDY52906	Canola	plastid	26.48	23.84
CDY53756	Canola	endoplasmic reticulum	26.74	23.74

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	GO:A0A078GAD3	UniProt:A0A078GAD3
EnsemblPlants:CDY23400	ProteinID:CDY23400	ProteinID:CDY23400.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00022009001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EE7B14
SEG:seg	:	:	:	:	:

Description

BnaC04g49280DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078GAD3]

Coordinates

chrLK032143:-:288021..290415

Molecular Weight (calculated)

41205.9 Da

IEP (calculated)

7.781

GRAVY (calculated)

0.021

Length

389 amino acids

Sequence
(BLAST)

001: MAAATSSSSG FLLNPLTSRH RPFNYSPQLA SLSLSSRKAA AFTLNSQSQR CSDVVCKAVS AKVEAGVEGL NIAENAAQLI GKTPMVYLNN IVKGCVASVA
101: AKLEIMEPCC SVKDRIGYSM ITDAEEKGLI TPGKSVLVES TSGNTGIGLA FIAASKGYKL ILTMPASMSL ERRVLLRAFG AELVLTEPAK GMTGAIQKAE
201: EILKNTPNSY MLQQFDNPAN PKIHYETTGP EIWEDTRGKV DILVAGIGTG GTITGVGRFI KERKPELKVI GVEPTESAIL AGGKPGPHKI QGIGAGFIPK
301: NLDQSVVDEY ISISSDEAIE TAKQLALQEG LLVGISSGAA AAAAIQVAKR PENAGKLIAV VFPSFGERYL STMLFQSIRE ECEKMQPEI

Best Arabidopsis Sequence Match ( AT2G43750.2 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.