Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040417.1-P | Field mustard | cytosol | 70.97 | 14.1 |
| CDY41913 | Canola | cytosol | 66.13 | 13.49 |
| CDX74160 | Canola | cytosol | 69.35 | 13.4 |
| CDY69239 | Canola | cytosol | 69.35 | 13.4 |
| CDY41911 | Canola | cytosol | 66.13 | 12.77 |
| CDY50768 | Canola | cytosol | 66.13 | 12.77 |
| CDX86187 | Canola | cytosol | 61.29 | 12.5 |
| CDY00007 | Canola | cytosol | 64.52 | 12.38 |
| CDX80680 | Canola | cytosol | 59.68 | 12.17 |
| CDY19703 | Canola | cytosol | 62.9 | 12.07 |
| CDY05586 | Canola | cytosol | 61.29 | 11.76 |
| CDY52498 | Canola | cytosol | 61.29 | 11.76 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 58.06 | 11.15 |
| KRH13764 | Soybean | cytosol | 56.45 | 10.9 |
| KRG92757 | Soybean | cytosol | 56.45 | 10.84 |
| KRH34052 | Soybean | cytosol | 56.45 | 10.8 |
| GSMUA_Achr11P... | Banana | cytosol | 54.84 | 10.49 |
| KRH34037 | Soybean | cytosol | 53.23 | 10.22 |
| KXG24064 | Sorghum | cytosol | 53.23 | 10.15 |
| Zm00001d031136_P003 | Maize | plasma membrane | 53.23 | 10.15 |
| CDY00008 | Canola | mitochondrion | 56.45 | 9.97 |
| CDY19702 | Canola | mitochondrion | 56.45 | 9.97 |
| Solyc01g097930.2.1 | Tomato | cytosol | 51.61 | 9.91 |
| GSMUA_Achr4P21350_001 | Banana | cytosol | 51.61 | 9.85 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 51.61 | 9.85 |
| KRG92761 | Soybean | cytosol | 51.61 | 9.67 |
| Solyc01g097950.2.1 | Tomato | cytosol | 50.0 | 9.6 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 43.55 | 9.31 |
| GSMUA_Achr9P25760_001 | Banana | cytosol | 48.39 | 9.26 |
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 48.39 | 9.23 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 50.0 | 9.06 |
| CDY68436 | Canola | cytosol | 46.77 | 9.01 |
| CDY09039 | Canola | cytosol | 45.16 | 8.97 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 43.55 | 8.91 |
| CDY42795 | Canola | cytosol | 45.16 | 8.7 |
| Os12t0625000-01 | Rice | plasma membrane | 48.39 | 8.65 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 48.39 | 8.43 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 43.55 | 8.26 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 43.55 | 8.26 |
| CDY30438 | Canola | plastid | 51.61 | 8.23 |
| CDY23400 | Canola | plastid | 51.61 | 8.23 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 56.45 | 7.97 |
| CDY17914 | Canola | plastid | 50.0 | 7.91 |
| CDX79804 | Canola | plastid | 50.0 | 7.83 |
| KXG26295 | Sorghum | cytosol | 43.55 | 7.71 |
| CDY48919 | Canola | endoplasmic reticulum | 38.71 | 7.62 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 43.55 | 7.54 |
| CDY45790 | Canola | plastid | 50.0 | 7.26 |
| CDX89032 | Canola | plastid | 50.0 | 7.23 |
| Zm00001d003717_P001 | Maize | cytosol | 40.32 | 7.1 |
| TraesCS5B01G018700.3 | Wheat | plastid | 50.0 | 7.06 |
| TraesCS5A01G022200.1 | Wheat | plastid | 48.39 | 7.01 |
| HORVU5Hr1G005980.2 | Barley | plastid | 46.77 | 6.64 |
| CDX71737 | Canola | mitochondrion | 38.71 | 6.52 |
| CDX89116 | Canola | mitochondrion | 38.71 | 6.52 |
| CDY43932 | Canola | mitochondrion | 38.71 | 6.52 |
| KRH43690 | Soybean | cytosol | 24.19 | 6.44 |
| CDY29946 | Canola | plastid | 35.48 | 5.61 |
| CDY21176 | Canola | plastid | 35.48 | 5.6 |
| CDY52906 | Canola | plastid | 22.58 | 3.24 |
| CDY53756 | Canola | endoplasmic reticulum | 22.58 | 3.2 |
| HORVU5Hr1G082120.2 | Barley | mitochondrion, plastid | 4.84 | 1.6 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 3.23 | 1.02 |
| HORVU1Hr1G031220.3 | Barley | plastid | 4.84 | 0.74 |
| HORVU5Hr1G015070.1 | Barley | extracellular | 0.0 | 0.0 |
| HORVU3Hr1G040910.1 | Barley | mitochondrion | 0.0 | 0.0 |
| CDY68838 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY41915 | EnsemblPlantsGene:GSBRNA2T00073897001 | Gene3D:3.40.50.1100 | InterPro:Trypto_synt_PLP_dependent | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF97 |
| ProteinID:CDY41915 | ProteinID:CDY41915.1 | SUPFAM:SSF53686 | UniParc:UPI0004EE95B3 | UniProt:A0A078HTL2 | MapMan:35.2 |
Description
BnaC05g46890DBnaC05g46890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTL2]
Coordinates
chrLK032510:+:164559..166027
Molecular Weight (calculated)
6643.3 Da
IEP (calculated)
4.857
GRAVY (calculated)
0.481
Length
62 amino acids
Sequence
(BLAST)
(BLAST)
1: MNKPSLIRGV SCDHLGLHFQ GIGAGIIPDN LDLIVLDEII QVPGVEAIET ARLLALKEGL RV
001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ
Arabidopsis Description
CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.