CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69239	Canola	cytosol	99.07	99.07
CDY41913	Canola	cytosol	83.18	87.83
AT3G04940.1	Thale cress	cytosol	88.47	87.65
CDY50768	Canola	cytosol	84.42	84.42
CDY41911	Canola	cytosol	84.42	84.42
CDY52498	Canola	cytosol	79.44	78.95
CDY05586	Canola	cytosol	78.82	78.33
Bra001131.1-P	Field mustard	mitochondrion	96.88	77.75
CDY00007	Canola	cytosol	77.26	76.78
CDX86187	Canola	cytosol	72.27	76.32
CDY19703	Canola	cytosol	76.64	76.16
CDX80680	Canola	cytosol	71.65	75.66
KRH13764	Soybean	cytosol	73.21	73.21
CDY19702	Canola	mitochondrion	78.82	72.08
CDY00008	Canola	mitochondrion	78.5	71.79
VIT_14s0030g01520.t01	Wine grape	cytosol	71.65	71.21
KRH34052	Soybean	cytosol	71.34	70.68
KRG92757	Soybean	cytosol	71.03	70.59
KRH34037	Soybean	cytosol	70.09	69.66
CDY41915	Canola	cytosol	13.4	69.35
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	69.47	68.62
CDY29778	Canola	cytosol, peroxisome, plastid	64.17	67.99
CDY68436	Canola	cytosol	67.6	67.39
CDY42795	Canola	cytosol	67.6	67.39
GSMUA_Achr9P25760_001	Banana	cytosol	67.91	67.28
GSMUA_Achr11P...	Banana	cytosol	67.6	66.98
Zm00001d031136_P003	Maize	plasma membrane	67.6	66.77
TraesCS5D01G027600.1	Wheat	cytosol, golgi	67.6	66.77
GSMUA_Achr4P21350_001	Banana	cytosol	67.6	66.77
KRH43690	Soybean	cytosol	48.29	66.52
KXG24064	Sorghum	cytosol	67.29	66.46
CDY09039	Canola	cytosol	64.17	66.03
Solyc01g097940.1.1	Tomato	plasma membrane	39.56	64.8
Solyc01g097950.2.1	Tomato	cytosol	64.8	64.4
VIT_14s0030g01550.t01	Wine grape	cytosol	67.91	63.74
Solyc01g097930.2.1	Tomato	cytosol	62.31	61.92
TraesCS2B01G316800.1	Wheat	cytosol	62.93	61.77
TraesCS2A01G300600.1	Wheat	cytosol	62.93	61.77
HORVU3Hr1G040910.1	Barley	mitochondrion	6.54	61.76
Solyc01g097920.2.1	Tomato	cytosol, plastid	68.22	61.52
Os12t0625000-01	Rice	plasma membrane	66.36	61.38
HORVU2Hr1G074630.2	Barley	cytosol	53.58	59.31
TraesCS2D01G298600.2	Wheat	cytosol	63.24	56.7
KXG26295	Sorghum	cytosol	61.68	56.57
CDY23400	Canola	plastid	68.22	56.3
KRG92761	Soybean	cytosol	57.94	56.19
CDY30438	Canola	plastid	67.91	56.04
Zm00001d003717_P001	Maize	cytosol	61.37	55.97
CDY17914	Canola	plastid	67.91	55.61
CDX79804	Canola	plastid	68.22	55.3
VIT_14s0030g01490.t01	Wine grape	cytosol	70.72	51.71
CDY45790	Canola	plastid	66.67	50.12
CDX89032	Canola	plastid	66.98	50.12
HORVU5Hr1G015070.1	Barley	extracellular	10.59	50.0
TraesCS5A01G022200.1	Wheat	plastid	66.67	50.0
TraesCS5B01G018700.3	Wheat	plastid	67.6	49.43
HORVU5Hr1G005980.2	Barley	plastid	67.29	49.43
CDX71737	Canola	mitochondrion	55.14	48.1
CDX89116	Canola	mitochondrion	54.83	47.83
CDY43932	Canola	mitochondrion	54.52	47.55
CDY48919	Canola	endoplasmic reticulum	46.42	47.3
CDY29946	Canola	plastid	56.39	46.17
CDY21176	Canola	plastid	56.39	46.06
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	24.92	42.78
CDY68838	Canola	mitochondrion	14.33	33.82
HORVU1Hr1G031220.3	Barley	plastid	36.45	28.75
CDY52906	Canola	plastid	32.09	23.84
CDY53756	Canola	endoplasmic reticulum	32.4	23.74

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078CBJ4	EnsemblPlants:CDX74160
ProteinID:CDX74160	ProteinID:CDX74160.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00111922001	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EEAA27	SEG:seg	:	:

Description

BnaA03g28870D

Coordinates

chrLK031800:-:1599791..1602113

Molecular Weight (calculated)

34082.3 Da

IEP (calculated)

5.259

GRAVY (calculated)

-0.004

Length

321 amino acids

Sequence
(BLAST)

001: MECSIKDDVT QLIGNTPMVY LNNIVDGCVA RIATKLEMME PCSSVKERIA YGMIKDAEDK GLITPGKSTL IEPTSGNTGI GLAFVGAARG YKVVLTMPET
101: MSLERKIILL ALGAEVHLTD TKKGVQGLLD KAEEILSKTP DGIILHQFKN PSNPQTHYRT TGPEIWRDSA GEVDILVAGV GTGGTISGSG KFHKEKNKDL
201: KVYGVEPTES AVLSGGQPGP HLIQGIGAGI VPDNLDFNVL DEIIQVTSVE AIETARLLAL KEGLLVGISS GAAAAAAIKV AKRPENAGKL IVVVFPSGGE
301: RYLSTQLFDS VRREAESLTF E

Best Arabidopsis Sequence Match ( AT3G04940.2 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.