Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 2
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69239 | Canola | cytosol | 88.58 | 89.41 |
| CDX74160 | Canola | cytosol | 87.65 | 88.47 |
| CDY41913 | Canola | cytosol | 77.16 | 82.24 |
| AT5G28030.2 | Thale cress | cytosol | 78.09 | 78.33 |
| AT5G28020.1 | Thale cress | cytosol | 75.93 | 76.16 |
| KRG92757 | Soybean | cytosol | 73.15 | 73.37 |
| KRH34052 | Soybean | cytosol | 72.84 | 72.84 |
| KRH34037 | Soybean | cytosol | 72.53 | 72.76 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 71.3 | 71.52 |
| KRH13764 | Soybean | cytosol | 70.68 | 71.34 |
| Bra001131.1-P | Field mustard | mitochondrion | 87.35 | 70.75 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 70.06 | 69.85 |
| GSMUA_Achr11P... | Banana | cytosol | 68.52 | 68.52 |
| GSMUA_Achr9P25760_001 | Banana | cytosol | 67.9 | 67.9 |
| HORVU3Hr1G040910.1 | Barley | mitochondrion | 7.1 | 67.65 |
| Zm00001d031136_P003 | Maize | plasma membrane | 67.59 | 67.38 |
| GSMUA_Achr4P21350_001 | Banana | cytosol | 67.28 | 67.08 |
| KXG24064 | Sorghum | cytosol | 67.28 | 67.08 |
| AT3G22460.1 | Thale cress | cytosol | 51.54 | 66.8 |
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 66.98 | 66.77 |
| AT4G14880.5 | Thale cress | cytosol | 65.43 | 65.84 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 69.14 | 65.5 |
| Solyc01g097950.2.1 | Tomato | cytosol | 65.12 | 65.33 |
| KRH43690 | Soybean | cytosol | 46.6 | 64.81 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 38.89 | 64.29 |
| Solyc01g097930.2.1 | Tomato | cytosol | 62.35 | 62.54 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 62.65 | 62.08 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 62.65 | 62.08 |
| Os12t0625000-01 | Rice | plasma membrane | 66.36 | 61.96 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 67.9 | 61.8 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 53.7 | 60.0 |
| KRG92761 | Soybean | cytosol | 58.95 | 57.7 |
| KXG26295 | Sorghum | cytosol | 62.04 | 57.43 |
| HORVU5Hr1G015070.1 | Barley | extracellular | 12.04 | 57.35 |
| Zm00001d003717_P001 | Maize | cytosol | 62.04 | 57.1 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 62.65 | 56.7 |
| AT2G43750.1 | Thale cress | plastid | 68.21 | 56.38 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 70.68 | 52.16 |
| AT3G59760.1 | Thale cress | plastid | 67.28 | 50.35 |
| TraesCS5A01G022200.1 | Wheat | plastid | 66.05 | 50.0 |
| TraesCS5B01G018700.3 | Wheat | plastid | 66.98 | 49.43 |
| HORVU5Hr1G005980.2 | Barley | plastid | 66.67 | 49.43 |
| AT3G61440.1 | Thale cress | mitochondrion | 54.63 | 48.1 |
| AT3G03630.1 | Thale cress | plastid | 56.79 | 45.54 |
| HORVU5Hr1G082120.2 | Barley | mitochondrion, plastid | 24.38 | 42.25 |
| HORVU1Hr1G031220.3 | Barley | plastid | 36.11 | 28.75 |
| AT1G55880.1 | Thale cress | endoplasmic reticulum | 32.41 | 24.94 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:50.2.5 | EntrezGene:819654 | ProteinID:AAG51407.1 |
| EMBL:AB024284 | ProteinID:AEE74161.1 | EMBL:AJ011603 | ProteinID:ANM63824.1 | ArrayExpress:AT3G04940 | EnsemblPlantsGene:AT3G04940 |
| RefSeq:AT3G04940 | TAIR:AT3G04940 | RefSeq:AT3G04940-TAIR-G | EnsemblPlants:AT3G04940.1 | TAIR:AT3G04940.1 | Symbol:ATCYSD1 |
| EMBL:AY087675 | EMBL:AY136420 | EMBL:BT008721 | InterPro:CysK | InterPro:Cys_synth | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004124 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016829 | GO:GO:0019344 | GO:GO:0030170 | GO:GO:0050017 |
| RefSeq:NP_001325893.1 | RefSeq:NP_566243.1 | InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000263 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF97 | UniProt:Q9S6Z7 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 |
| TIGRFAMs:TIGR01139 | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI0000048D17 | SEG:seg | : | : |
Description
CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
Coordinates
chr3:+:1365090..1367844
Molecular Weight (calculated)
34296.5 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.004
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.