Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G373800.1 | |
| TraesCS6B01G411500.1 | |
| TraesCS6D01G358000.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | TraesCS6A01G373800.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6B01G411500.1 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | TraesCS6D01G358000.1 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031136_P003 | Maize | plasma membrane | 91.08 | 91.08 |
| KXG24064 | Sorghum | cytosol | 91.08 | 91.08 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 86.46 | 86.46 |
| Os12t0625000-01 | Rice | plasma membrane | 90.15 | 84.44 |
| Solyc09g082060.2.1 | Tomato | cytosol, nucleus, plastid | 83.69 | 83.69 |
| PGSC0003DMT400082113 | Potato | cytosol | 83.38 | 83.38 |
| CDY68436 | Canola | cytosol | 81.85 | 82.61 |
| Bra039708.1-P | Field mustard | cytosol | 81.85 | 82.61 |
| AT4G14880.5 | Thale cress | cytosol | 81.54 | 82.3 |
| KRH27640 | Soybean | cytosol | 81.85 | 81.85 |
| CDY42795 | Canola | cytosol | 80.92 | 81.68 |
| KRH68699 | Soybean | cytosol | 81.54 | 81.54 |
| Bra036910.1-P | Field mustard | plastid | 79.69 | 81.19 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 75.69 | 81.19 |
| CDY09039 | Canola | cytosol | 77.23 | 80.45 |
| KRG96937 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 80.31 | 80.31 |
| AT3G22460.1 | Thale cress | cytosol | 61.54 | 80.0 |
| KRH77854 | Soybean | cytosol | 18.15 | 79.73 |
| KRG91325 | Soybean | cytosol, mitochondrion, nucleus | 78.15 | 78.15 |
| TraesCS5A01G022200.1 | Wheat | plastid | 98.77 | 75.0 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 73.85 | 74.3 |
| KRH35519 | Soybean | cytosol | 69.23 | 73.77 |
| HORVU5Hr1G005980.2 | Barley | plastid | 98.77 | 73.46 |
| KRH13764 | Soybean | cytosol | 72.0 | 72.9 |
| TraesCS5B01G018700.3 | Wheat | plastid | 98.46 | 72.89 |
| KRG92757 | Soybean | cytosol | 70.77 | 71.21 |
| KRH34052 | Soybean | cytosol | 70.15 | 70.37 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 73.85 | 70.18 |
| KRH43690 | Soybean | cytosol | 49.23 | 68.67 |
| CDY69239 | Canola | cytosol | 67.69 | 68.54 |
| AT5G28020.1 | Thale cress | cytosol | 68.0 | 68.42 |
| CDY41911 | Canola | cytosol | 67.08 | 67.91 |
| CDX74160 | Canola | cytosol | 66.77 | 67.6 |
| CDY50768 | Canola | cytosol | 66.77 | 67.6 |
| KRH34037 | Soybean | cytosol | 67.08 | 67.49 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 74.15 | 67.32 |
| CDY52498 | Canola | cytosol | 66.77 | 67.18 |
| Bra036115.1-P | Field mustard | cytosol | 66.77 | 67.18 |
| Solyc01g097950.2.1 | Tomato | cytosol | 66.77 | 67.18 |
| AT3G04940.1 | Thale cress | cytosol | 66.77 | 66.98 |
| CDY05586 | Canola | cytosol | 66.15 | 66.56 |
| CDY19703 | Canola | cytosol | 66.15 | 66.56 |
| CDY00007 | Canola | cytosol | 66.15 | 66.56 |
| CDX86187 | Canola | cytosol | 62.15 | 66.45 |
| CDY41913 | Canola | cytosol | 61.85 | 66.12 |
| Bra009985.1-P | Field mustard | cytosol | 56.31 | 66.06 |
| AT5G28030.2 | Thale cress | cytosol | 65.54 | 65.94 |
| CDX80680 | Canola | cytosol | 61.54 | 65.79 |
| Solyc01g097930.2.1 | Tomato | cytosol | 64.62 | 65.02 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 70.46 | 64.33 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 38.77 | 64.29 |
| CDY19702 | Canola | mitochondrion | 66.77 | 61.82 |
| CDY00008 | Canola | mitochondrion | 66.77 | 61.82 |
| Bra036114.1-P | Field mustard | cytosol | 64.0 | 60.82 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 72.62 | 60.51 |
| TraesCS3D01G087300.1 | Wheat | plastid | 72.31 | 59.95 |
| Bra001131.1-P | Field mustard | mitochondrion | 67.69 | 55.0 |
| KRG92761 | Soybean | cytosol | 55.69 | 54.68 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 73.54 | 54.44 |
| TraesCS7D01G363000.1 | Wheat | cytosol | 54.77 | 52.51 |
| TraesCS3D01G332100.1 | Wheat | plastid | 60.31 | 51.72 |
| Bra020605.1-P | Field mustard | mitochondrion | 66.15 | 49.54 |
| TraesCS7D01G096800.1 | Wheat | cytoskeleton, cytosol, plastid | 52.62 | 49.28 |
| CDY41915 | Canola | cytosol | 9.23 | 48.39 |
| Bra040417.1-P | Field mustard | cytosol | 43.08 | 44.87 |
| TraesCS6D01G174200.1 | Wheat | cytosol | 39.38 | 44.44 |
| TraesCS7D01G096700.1 | Wheat | mitochondrion | 52.0 | 42.68 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 83.38 | 38.66 |
| TraesCS4D01G244300.1 | Wheat | plastid | 33.23 | 24.49 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:4.1.4.2.2 | InterPro:CysK | InterPro:Cys_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep |
| ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF160 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 |
| EnsemblPlantsGene:TraesCS5D01G027600 | EnsemblPlants:TraesCS5D01G027600.1 | InterPro:Trypto_synt_PLP_dependent | TIGR:cd01561 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:25278248..25281743
Molecular Weight (calculated)
34074.4 Da
IEP (calculated)
5.493
GRAVY (calculated)
0.067
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEASSPAIA KDVTELIGNT PLVYLNKVTD GCVGRVAAKL ESMEPCSSVK DRIGYSMITD AEEKGFIVPG KSVLIEPTSG NTGIGLAFMA AAKGYRLVLT
101: MPASMSMERR IILKAFGAEL VLTDPLLGMK GAVQKAEELA AKTPNSYILQ QFENAANPKI HYETTGPEIW KGTGGKIDGL VSGIGTGGTI TGSGKYLKEQ
201: NPNIKLYGVE PTESAVLNGG KPGPHKIQGI GAGFIPGVLD VDIIDETIQV SSDESIEMAK SLALKEGLLV GISSGAAAAA AIKVAQRPEN AGKLFVVVFP
301: SFGERYLSSV LFHSIKKEAE SMVVE
101: MPASMSMERR IILKAFGAEL VLTDPLLGMK GAVQKAEELA AKTPNSYILQ QFENAANPKI HYETTGPEIW KGTGGKIDGL VSGIGTGGTI TGSGKYLKEQ
201: NPNIKLYGVE PTESAVLNGG KPGPHKIQGI GAGFIPGVLD VDIIDETIQV SSDESIEMAK SLALKEGLLV GISSGAAAAA AIKVAQRPEN AGKLFVVVFP
301: SFGERYLSSV LFHSIKKEAE SMVVE
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.