Factsheet for TraesCS6D01G358000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G300600.1
TraesCS2B01G316800.1
TraesCS2D01G298600.2
TraesCS3A01G087100.1
TraesCS3B01G102500.1
TraesCS3D01G087300.1
TraesCS5A01G022200.1
TraesCS5B01G018700.3
TraesCS5D01G027600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	TraesCS3A01G087100.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS3B01G102500.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS3D01G087300.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS2A01G300600.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS2B01G316800.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS2D01G298600.2	AT3G04940.1	21798944
AT5G54390.1	TraesCS5A01G022200.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS5B01G018700.3	AT3G04940.1	21798944
AT5G54390.1	TraesCS5D01G027600.1	AT3G04940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G411500.1	Wheat	plastid	89.98	89.98
TraesCS6A01G373800.1	Wheat	plastid	90.19	89.81
HORVU6Hr1G087990.4	Barley	mitochondrion	69.72	84.5
OQU85910	Sorghum	mitochondrion	75.69	79.42
GSMUA_Achr8P07520_001	Banana	cytosol	59.7	73.68
Zm00001d051988_P001	Maize	mitochondrion	70.15	73.6
GSMUA_Achr11P...	Banana	cytosol	60.34	72.19
Os02t0805500-01	Rice	cytosol	72.28	71.07
VIT_00s0301g00050.t01	Wine grape	cytosol	58.42	69.9
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	56.72	69.82
KRH26049	Soybean	cytosol	54.58	66.84
PGSC0003DMT400057610	Potato	cytosol	55.86	66.84
KRH55364	Soybean	cytosol	53.94	66.4
Bra002992.1-P	Field mustard	cytosol	51.81	64.97
CDY66135	Canola	cytosol	51.39	64.78
CDY48649	Canola	cytosol	51.39	64.78
CDY42446	Canola	cytosol	51.6	64.71
AT5G54390.1	Thale cress	cytosol	51.39	64.61
Bra022717.1-P	Field mustard	cytosol	51.17	64.52
CDY18326	Canola	cytosol	51.17	64.0
Solyc12g013560.1.1	Tomato	cytosol	51.39	62.92
PGSC0003DMT400022081	Potato	cytosol	50.53	62.04
Solyc02g078860.2.1	Tomato	plastid	56.5	59.15
KRH10771	Soybean	cytosol, mitochondrion, nucleus	58.21	58.71
KRH21552	Soybean	cytosol, mitochondrion, plastid	57.57	58.06
KRH49963	Soybean	plastid	49.25	50.55
KRH20546	Soybean	plastid	48.61	50.44
TraesCS5D01G126800.3	Wheat	plastid	34.33	37.79
TraesCS2D01G209700.1	Wheat	mitochondrion	24.52	26.81
TraesCS6D01G216000.1	Wheat	mitochondrion	25.16	26.34

Protein Annotations

KEGG:00920+3.1.3.7	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	InterPro:Bisphos_HAL2	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152	GO:GO:0008441
GO:GO:0009987	GO:GO:0016787	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS
PFAM:PF00459	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200	PANTHER:PTHR43200:SF5	SUPFAM:SSF56655
TIGRFAMs:TIGR01330	EnsemblPlantsGene:TraesCS6D01G358000	EnsemblPlants:TraesCS6D01G358000.1	TIGR:cd01517	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:451157519..451159719

Molecular Weight (calculated)

49922.2 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.148

Length

469 amino acids

Sequence
(BLAST)

001: MGGLRLSAWA AAPSPSPSPS SAAARGFPRS PPDWRGSERG RRSRCAPSSP PSASPALSLG AAGRLRVGAD REWLWDCRGG GLGGGGGKKD YAKEMEAAVR
101: VVQVACTLCQ RVQDALLLAD PGSGSGGVHS KLDRSPVTVA DWGVQATVSW LLSDRFGDES VSIVAEEDDE TLSSSDGTAL LESVVAAVNG CLVEAPKYGL
201: RSPEKDLGAH DVLQAIRKCS STGGPKGRFW VLDPVDGTLG FVRGDQYAIA LALIEDGEVV LGVLGCPNYP MKKEWLNYHQ RYYRLMSKVA PPTSGTWNKG
301: CVMYAHKGCG QAWMQPLVHD FGMLSWHNSR EVQVSSVSDP VSATFCEPVE KANSSHSFTA GLAHSVGLRN QPLRVYSMVK YAAIARGDAE IFMKFARAGY
401: KEKIWDHAAG VVIIQEAGGV VTDAGGCPLD FSRGVYLEGL DRGIIACSGA LLHRRILEAV DASWNSSTL

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.