Factsheet for PGSC0003DMT400022081

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400059624

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	PGSC0003DMT400059624	AT2G43750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g013560.1.1	Tomato	cytosol	96.34	96.08
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	70.68	70.87
KRH26049	Soybean	cytosol	68.85	68.67
KRH55364	Soybean	cytosol	67.8	67.98
CDY48649	Canola	cytosol	63.61	65.32
Bra022717.1-P	Field mustard	cytosol	63.35	65.05
CDY66135	Canola	cytosol	63.09	64.78
AT5G54390.1	Thale cress	cytosol	62.57	64.08
GSMUA_Achr8P07520_001	Banana	cytosol	63.35	63.68
Bra002992.1-P	Field mustard	cytosol	62.3	63.64
CDY18326	Canola	cytosol	62.04	63.2
CDY42446	Canola	cytosol	61.78	63.1
PGSC0003DMT400057610	Potato	cytosol	64.14	62.5
GSMUA_Achr11P...	Banana	cytosol	63.35	61.73
HORVU6Hr1G087990.4	Barley	mitochondrion	57.85	57.11
OQU85910	Sorghum	mitochondrion	60.21	51.45
TraesCS6B01G411500.1	Wheat	plastid	62.57	50.96
TraesCS6D01G358000.1	Wheat	plastid	62.04	50.53
TraesCS6A01G373800.1	Wheat	plastid	62.04	50.32
Os02t0805500-01	Rice	cytosol	60.73	48.64
Zm00001d051988_P001	Maize	mitochondrion	56.28	48.1
PGSC0003DMT400059942	Potato	cytosol	39.01	42.69

Protein Annotations

KEGG:00920+3.1.3.7	EntrezGene:102583745	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	InterPro:Bisphos_HAL2
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152
GO:GO:0008441	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS
InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS	UniProt:M1AG54	PFAM:PF00459	EnsemblPlantsGene:PGSC0003DMG400008568	PGSC:PGSC0003DMG400008568
EnsemblPlants:PGSC0003DMT400022081	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200	PANTHER:PTHR43200:SF1	SUPFAM:SSF56655
TIGRFAMs:TIGR01330	UniParc:UPI000294DAD7	RefSeq:XP_006349983.1	SEG:seg	:	:

Description

Diphosphonucleoside phosphohydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400008568]

Coordinates

chr12:-:950505..956970

Molecular Weight (calculated)

41246.7 Da

IEP (calculated)

5.154

GRAVY (calculated)

-0.226

Length

382 amino acids

Sequence
(BLAST)

001: MEKEKYSEEL NVAVRVVHMA CGLCQKVQKG FLGNALDDDE VKSKDDDSLV TIADWSVQAT VSWILSNTFG SENVSIVAEE DVQTLSKPES AGLLGKVVST
101: VNECLAQASR YGLKGPDKTL GPSEILEAIS RCNSNGGPRG RHWVLDPVDG TLGFVRGGQY AVALALIDNA EVVVGVLGCP NYHMKRDRHN KQQQNHISSE
201: VSVPSPDMLE EGCVMYSKKG TGEAWVQPTV SGDSQYEWPN FAKQVRVSPI DDPALATFCE PVERDNSNHS FAAGLASSVG LRNKPLRVYS MVKYAAIAQG
301: DAEIFMKFAR AGYKEKIWDH AAGVLIVQEA GGVVTDAGGR SLDFSKGIYL ESLDRGIVAC SGTKLHEKLI GAVYASWESS SP

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.