CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92757
KRG92761
KRH13764
KRH34037
KRH34052
KRH43690
KRH50190
KRH71273

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	KRH50190	AT2G43750.1	21798944
AT5G54390.1	KRH71273	AT2G43750.1	21798944
AT5G54390.1	KRG92757	AT3G04940.1	21798944
AT5G54390.1	KRG92761	AT3G04940.1	21798944
AT5G54390.1	KRH13764	AT3G04940.1	21798944
AT5G54390.1	KRH34037	AT3G04940.1	21798944
AT5G54390.1	KRH34052	AT3G04940.1	21798944
AT5G54390.1	KRH43690	AT3G04940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55364	Soybean	cytosol	95.3	95.8
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	74.15	74.54
PGSC0003DMT400022081	Potato	cytosol	68.67	68.85
Solyc12g013560.1.1	Tomato	cytosol	68.41	68.41
AT5G54390.1	Thale cress	cytosol	66.58	68.36
GSMUA_Achr8P07520_001	Banana	cytosol	67.36	67.89
Bra022717.1-P	Field mustard	cytosol	65.27	67.2
CDY48649	Canola	cytosol	65.27	67.2
CDY66135	Canola	cytosol	65.27	67.2
CDY18326	Canola	cytosol	65.54	66.93
Bra002992.1-P	Field mustard	cytosol	65.27	66.84
CDY42446	Canola	cytosol	65.01	66.58
GSMUA_Achr11P...	Banana	cytosol	66.58	65.05
HORVU6Hr1G087990.4	Barley	mitochondrion	60.05	59.43
KRH10771	Soybean	cytosol, mitochondrion, nucleus	69.45	57.2
KRH21552	Soybean	cytosol, mitochondrion, plastid	69.19	56.99
OQU85910	Sorghum	mitochondrion	65.27	55.93
TraesCS6D01G358000.1	Wheat	plastid	66.84	54.58
TraesCS6B01G411500.1	Wheat	plastid	66.58	54.37
TraesCS6A01G373800.1	Wheat	plastid	66.06	53.72
Os02t0805500-01	Rice	cytosol	64.23	51.57
Zm00001d051988_P001	Maize	mitochondrion	60.05	51.45
KRH20546	Soybean	plastid	55.87	47.35
KRH49963	Soybean	plastid	55.61	46.61
KRH58509	Soybean	cytosol	38.9	42.57
KRH42388	Soybean	mitochondrion	38.38	36.39
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	26.89	31.99
KRH10744	Soybean	plastid	30.03	28.54

Protein Annotations

KEGG:00920+3.1.3.7	EntrezGene:100806320	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	EMBL:ACUP02007444
InterPro:Bisphos_HAL2	EnsemblPlantsGene:GLYMA_12G148400	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006790
GO:GO:0008150	GO:GO:0008152	GO:GO:0008441	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0046854	UniProt:I1LT10	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS	EnsemblPlants:KRH26049
ProteinID:KRH26049	ProteinID:KRH26049.1	PFAM:PF00459	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200
PANTHER:PTHR43200:SF1	SUPFAM:SSF56655	TIGRFAMs:TIGR01330	UniParc:UPI000233D609	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:+:20850498..20856243

Molecular Weight (calculated)

41495.4 Da

IEP (calculated)

4.760

GRAVY (calculated)

-0.040

Length

383 amino acids

Sequence
(BLAST)

001: MEKEEDKYAK ELEVAVRVVH VACALCGRVQ ERLLATTNDH VVAKDDDSPV TVADFSVQAT ISWLLSEILG VQNVSIVAEE DIETISKDES ASLLEAVVNT
101: VNESLAFASK YGLQCPETTL GTPEVLEAIA RCNSTGGPRG RYWVLDPVDG TLGFVRGDQY AVALALIEDG KVVLGVLGCP NYPVKIEWLN YHYQHHQTMP
201: ESSLKTPDTG GKGCVLYARK GSGEAWLQSL IDGDNMLEWP NCARLIRVSS IDDPALATLC EPVERANSNH SFTAGLAHSV GLRKQPLRVH SMVKYAAIAR
301: GDAEIFMKFA KCGYKEKIWD HAAGVVIVEE AGGVVTDAGG RPLDFSKGMY LEGLDRGIIA CSGVALHEKL IDAVYASWDS SNL

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.