CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92757
KRG92761
KRH13764
KRH34037
KRH34052
KRH43690
KRH50190
KRH71273

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	KRH50190	AT2G43750.1	21798944
AT5G54390.1	KRH71273	AT2G43750.1	21798944
AT5G54390.1	KRG92757	AT3G04940.1	21798944
AT5G54390.1	KRG92761	AT3G04940.1	21798944
AT5G54390.1	KRH13764	AT3G04940.1	21798944
AT5G54390.1	KRH34037	AT3G04940.1	21798944
AT5G54390.1	KRH34052	AT3G04940.1	21798944
AT5G54390.1	KRH43690	AT3G04940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26049	Soybean	cytosol	95.8	95.3
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	72.7	72.7
PGSC0003DMT400022081	Potato	cytosol	67.98	67.8
GSMUA_Achr8P07520_001	Banana	cytosol	67.19	67.37
Solyc12g013560.1.1	Tomato	cytosol	67.72	67.36
AT5G54390.1	Thale cress	cytosol	65.35	66.76
CDY66135	Canola	cytosol	64.3	65.86
CDY48649	Canola	cytosol	64.3	65.86
Bra022717.1-P	Field mustard	cytosol	64.3	65.86
Bra002992.1-P	Field mustard	cytosol	64.57	65.78
CDY18326	Canola	cytosol	64.57	65.6
CDY42446	Canola	cytosol	64.04	65.24
GSMUA_Achr11P...	Banana	cytosol	66.93	65.05
HORVU6Hr1G087990.4	Barley	mitochondrion	60.1	59.17
KRH10771	Soybean	cytosol, mitochondrion, nucleus	69.29	56.77
KRH21552	Soybean	cytosol, mitochondrion, plastid	69.03	56.56
OQU85910	Sorghum	mitochondrion	65.09	55.48
TraesCS6D01G358000.1	Wheat	plastid	66.4	53.94
TraesCS6B01G411500.1	Wheat	plastid	66.4	53.94
TraesCS6A01G373800.1	Wheat	plastid	66.14	53.5
Zm00001d051988_P001	Maize	mitochondrion	60.37	51.45
Os02t0805500-01	Rice	cytosol	63.52	50.73
KRH20546	Soybean	plastid	55.64	46.9
KRH49963	Soybean	plastid	55.12	45.95
KRH58509	Soybean	cytosol	38.85	42.29
KRH42388	Soybean	mitochondrion	38.32	36.14
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	26.51	31.37
KRH10744	Soybean	plastid	30.18	28.54

Protein Annotations

KEGG:00920+3.1.3.7	EntrezGene:100814009	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	EMBL:ACUP02003970
InterPro:Bisphos_HAL2	EnsemblPlantsGene:GLYMA_06G249500	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006790
GO:GO:0008150	GO:GO:0008152	GO:GO:0008441	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0046854	UniProt:I1KE06	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS	ProteinID:KRH55363.1
EnsemblPlants:KRH55364	ProteinID:KRH55364	ProteinID:KRH55364.1	PFAM:PF00459	ScanProsite:PS00629	ScanProsite:PS00630
PANTHER:PTHR43200	PANTHER:PTHR43200:SF1	SUPFAM:SSF56655	TIGRFAMs:TIGR01330	UniParc:UPI00023C300E	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:42137066..42145333

Molecular Weight (calculated)

41218.8 Da

IEP (calculated)

4.741

GRAVY (calculated)

-0.033

Length

381 amino acids

Sequence
(BLAST)

001: MEEDKYAKEL EVAVRVVHVA CALCGRVQER LLATTNDHVL AKDDDSPVTV ADFSVQATIS WLLSEIFGVQ NVSIIAEEDI QTISKDESAS LLEAVVNTVN
101: ESLAFASKYG FQSPETTLGT SEVLEAIARC NSTGGSRGRY WVLDPVDGTL GFVRGDQYAI ALALIEDGKV VLGVLGCPNY PVKTEWLSYH YQHHQTAPES
201: SLTTPDTGGK GCVLYARKGS GEAWLQSLID GDNMLEWSNC ARLIRVSSIE DPALATLCEP VERANSNHSF TAGLAHSVGL RKQPLRVHSM VKYAAIARGD
301: AEIFMKFAKC GYKEKIWDHA AGVVIVEEAG GVVTDAGGRP LDFSKGMYLE GLDRGIIACS GVTLHEKLID AVYASWDSSN L

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.