CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74160
CDX79804
CDY17914
CDY23400
CDY30438
CDY41913
CDY69239

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	CDX79804	AT2G43750.1	21798944
AT5G54390.1	CDY17914	AT2G43750.1	21798944
AT5G54390.1	CDY23400	AT2G43750.1	21798944
AT5G54390.1	CDY30438	AT2G43750.1	21798944
AT5G54390.1	CDX74160	AT3G04940.1	21798944
AT5G54390.1	CDY41913	AT3G04940.1	21798944
AT5G54390.1	CDY69239	AT3G04940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022717.1-P	Field mustard	cytosol	98.92	98.92
CDY66135	Canola	cytosol	94.89	94.89
AT5G54390.1	Thale cress	cytosol	87.1	86.86
CDY42446	Canola	cytosol	86.02	85.56
CDY18326	Canola	cytosol	85.75	85.07
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	68.28	66.67
KRH26049	Soybean	cytosol	67.2	65.27
KRH55364	Soybean	cytosol	65.86	64.3
Solyc12g013560.1.1	Tomato	cytosol	66.13	64.23
PGSC0003DMT400022081	Potato	cytosol	65.32	63.61
GSMUA_Achr8P07520_001	Banana	cytosol	64.25	62.89
GSMUA_Achr11P...	Banana	cytosol	64.25	60.97
HORVU6Hr1G087990.4	Barley	mitochondrion	59.14	56.85
OQU85910	Sorghum	mitochondrion	63.17	52.57
TraesCS6B01G411500.1	Wheat	plastid	64.78	51.39
TraesCS6D01G358000.1	Wheat	plastid	64.78	51.39
TraesCS6A01G373800.1	Wheat	plastid	63.98	50.53
Os02t0805500-01	Rice	cytosol	63.71	49.69
Zm00001d051988_P001	Maize	mitochondrion	58.6	48.77
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	42.74	44.41
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	42.47	44.13
CDY43776	Canola	cytosol	41.94	43.94
CDY39832	Canola	mitochondrion	38.17	40.8
CDY31341	Canola	cytosol, mitochondrion, plastid	38.17	40.8
CDX84472	Canola	plastid	42.74	39.07
CDY43778	Canola	mitochondrion	37.9	39.06
CDY43777	Canola	plastid	37.1	38.44
CDX84473	Canola	plastid	37.1	38.44
CDX84474	Canola	mitochondrion	37.1	38.23
CDY39833	Canola	mitochondrion	24.19	36.59
CDY44753	Canola	mitochondrion	29.3	28.09
CDY16618	Canola	mitochondrion, plastid	29.3	28.09

Protein Annotations

KEGG:00920+3.1.3.7	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	GO:A0A078IGW9	UniProt:A0A078IGW9
InterPro:Bisphos_HAL2	EnsemblPlants:CDY48649	ProteinID:CDY48649	ProteinID:CDY48649.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152	GO:GO:0008441	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0046854	EnsemblPlantsGene:GSBRNA2T00091427001	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like
InterPro:Inositol_monophosphatase_CS	PFAM:PF00459	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200	PANTHER:PTHR43200:SF1
SUPFAM:SSF56655	TIGRFAMs:TIGR01330	UniParc:UPI0004EE8390	SEG:seg	:	:

Description

BnaCnng16680DBnaCnng16680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGW9]

Coordinates

chrLK032784:-:103068..105325

Molecular Weight (calculated)

39157.8 Da

IEP (calculated)

5.236

GRAVY (calculated)

0.066

Length

372 amino acids

Sequence
(BLAST)

001: MAVEFLATEM DTAVRVVHLA SSLCVKVQDK LRLPSSTNGH VKSKDDDSPV TVADWGVQAI VSWVLAQVFG GQNLSIVAEE DTESLSKAES LGLLGTVSSA
101: VNEALSEAST YGLPKPDKPL GTTEILEAIG RCSSVGGPKG RHWVLDPVDG TLGFVRGDQY AVALALIENG KVLLGVLGCP NYPVKKECLS NGCNNQSGAA
201: GSVTKGCVMY AKRGSGQAWM QPLIPGGYPE SATLLKVSSV DDPVLATVCE PVERANSNHL FTAGLANSMG VRKQPMRVYS MVKYAAIACG DAEVFMKFAQ
301: SSYKEKIWDH AAGVVIVEEA GGVVTDAGGR NLDFSKGVYL EGLDRGIIAC SGQVLHEKII GAVYASWESS SL

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.