CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74160	Canola	cytosol	99.07	99.07
AT3G04940.1	Thale cress	cytosol	89.41	88.58
CDY41913	Canola	cytosol	83.49	88.16
CDY50768	Canola	cytosol	84.74	84.74
CDY41911	Canola	cytosol	84.74	84.74
CDY52498	Canola	cytosol	79.75	79.26
CDY05586	Canola	cytosol	79.13	78.64
Bra001131.1-P	Field mustard	mitochondrion	97.82	78.5
CDY00007	Canola	cytosol	77.57	77.09
CDX86187	Canola	cytosol	72.59	76.64
CDY19703	Canola	cytosol	76.95	76.47
CDX80680	Canola	cytosol	71.96	75.99
KRH13764	Soybean	cytosol	74.14	74.14
CDY19702	Canola	mitochondrion	79.13	72.36
VIT_14s0030g01520.t01	Wine grape	cytosol	72.59	72.14
CDY00008	Canola	mitochondrion	78.82	72.08
KRH34052	Soybean	cytosol	71.65	70.99
KRG92757	Soybean	cytosol	71.34	70.9
KRH34037	Soybean	cytosol	71.03	70.59
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	70.41	69.54
CDY41915	Canola	cytosol	13.4	69.35
CDY29778	Canola	cytosol, peroxisome, plastid	65.11	68.98
CDY68436	Canola	cytosol	68.54	68.32
CDY42795	Canola	cytosol	68.54	68.32
GSMUA_Achr9P25760_001	Banana	cytosol	68.85	68.21
GSMUA_Achr11P...	Banana	cytosol	68.54	67.9
KRH43690	Soybean	cytosol	49.22	67.81
Zm00001d031136_P003	Maize	plasma membrane	68.54	67.69
TraesCS5D01G027600.1	Wheat	cytosol, golgi	68.54	67.69
GSMUA_Achr4P21350_001	Banana	cytosol	68.54	67.69
KXG24064	Sorghum	cytosol	68.22	67.38
CDY09039	Canola	cytosol	65.11	66.99
Solyc01g097940.1.1	Tomato	plasma membrane	39.56	64.8
HORVU3Hr1G040910.1	Barley	mitochondrion	6.85	64.71
Solyc01g097950.2.1	Tomato	cytosol	65.11	64.71
VIT_14s0030g01550.t01	Wine grape	cytosol	68.85	64.62
TraesCS2B01G316800.1	Wheat	cytosol	63.86	62.69
TraesCS2A01G300600.1	Wheat	cytosol	63.86	62.69
Os12t0625000-01	Rice	plasma membrane	67.29	62.25
Solyc01g097930.2.1	Tomato	cytosol	62.62	62.23
Solyc01g097920.2.1	Tomato	cytosol, plastid	68.54	61.8
HORVU2Hr1G074630.2	Barley	cytosol	54.52	60.34
TraesCS2D01G298600.2	Wheat	cytosol	64.17	57.54
KXG26295	Sorghum	cytosol	62.62	57.43
KRG92761	Soybean	cytosol	58.88	57.1
Zm00001d003717_P001	Maize	cytosol	62.31	56.82
CDY23400	Canola	plastid	68.85	56.81
CDY30438	Canola	plastid	68.54	56.56
CDY17914	Canola	plastid	68.54	56.12
CDX79804	Canola	plastid	68.85	55.81
VIT_14s0030g01490.t01	Wine grape	cytosol	71.65	52.39
HORVU5Hr1G015070.1	Barley	extracellular	10.9	51.47
TraesCS5A01G022200.1	Wheat	plastid	67.6	50.7
CDY45790	Canola	plastid	66.67	50.12
CDX89032	Canola	plastid	66.98	50.12
HORVU5Hr1G005980.2	Barley	plastid	68.22	50.11
TraesCS5B01G018700.3	Wheat	plastid	68.54	50.11
CDX71737	Canola	mitochondrion	56.07	48.91
CDX89116	Canola	mitochondrion	55.76	48.64
CDY43932	Canola	mitochondrion	55.45	48.37
CDY48919	Canola	endoplasmic reticulum	47.04	47.94
CDY29946	Canola	plastid	57.32	46.94
CDY21176	Canola	plastid	57.32	46.82
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	25.55	43.85
CDY68838	Canola	mitochondrion	14.64	34.56
HORVU1Hr1G031220.3	Barley	plastid	37.38	29.48
CDY52906	Canola	plastid	32.4	24.07
CDY53756	Canola	endoplasmic reticulum	32.71	23.97

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078JQZ5	UniProt:A0A078JQZ5
EnsemblPlants:CDY69239	ProteinID:CDY69239	ProteinID:CDY69239.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00084257001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EEB3CD
SEG:seg	:	:	:	:	:

Description

BnaCnng62620DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078JQZ5]

Coordinates

chrLK038930:+:1443..3854

Molecular Weight (calculated)

34000.2 Da

IEP (calculated)

5.106

GRAVY (calculated)

0.028

Length

321 amino acids

Sequence
(BLAST)

001: MECSIKDDVT QLIGNTPMVY LNNIVDGCVA RIAAKLEMME PCSSVKERIA YGMIKDAEDK GLITPGKSTL IEPTSGNTGI GLAFVGAAKG YKVVLTMPET
101: MSLERKIILL ALGAEVHLTD TKKGVQGLLD KAEEILSKTP DGIILHQFKN PSNPQTHYRT TGPEIWRDSA GEVDILVAGV GTGGTISGSG KFLKEKNKDL
201: KVYGVEPTES AVLSGGQPGP HLIQGIGAGI VPDNLDFNVL DEIIQVTSVE AIETARLLAL KEGLLVGISS GAAAAAAIKV AKRPENAGKL IVVVFPSGGE
301: RYLSTQLFDS VRREAESLTF E

Best Arabidopsis Sequence Match ( AT3G04940.2 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.