Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | CDY18326 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | CDY42446 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | CDY48649 | AT5G54390.1 | 21798944 |
| AT5G28020.1 | CDY66135 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00007 | Canola | cytosol | 99.07 | 99.07 |
| Bra036114.1-P | Field mustard | cytosol | 96.59 | 91.23 |
| CDY52498 | Canola | cytosol | 89.78 | 89.78 |
| CDX86187 | Canola | cytosol | 83.59 | 88.82 |
| CDY05586 | Canola | cytosol | 88.54 | 88.54 |
| CDX80680 | Canola | cytosol | 82.97 | 88.16 |
| AT5G28020.1 | Thale cress | cytosol | 85.76 | 85.76 |
| CDY69239 | Canola | cytosol | 76.47 | 76.95 |
| CDY19702 | Canola | mitochondrion | 83.59 | 76.92 |
| CDX74160 | Canola | cytosol | 76.16 | 76.64 |
| CDY41913 | Canola | cytosol | 71.83 | 76.32 |
| CDY00008 | Canola | mitochondrion | 82.35 | 75.78 |
| CDY50768 | Canola | cytosol | 74.3 | 74.77 |
| CDY41911 | Canola | cytosol | 74.3 | 74.77 |
| KRH13764 | Soybean | cytosol | 70.59 | 71.03 |
| KRG92757 | Soybean | cytosol | 69.35 | 69.35 |
| VIT_14s0030g01520.t01 | Wine grape | cytosol | 69.35 | 69.35 |
| KRH34052 | Soybean | cytosol | 68.73 | 68.52 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 68.73 | 68.31 |
| GSMUA_Achr11P... | Banana | cytosol | 67.49 | 67.28 |
| KRH43690 | Soybean | cytosol | 48.3 | 66.95 |
| KRH34037 | Soybean | cytosol | 66.87 | 66.87 |
| Zm00001d031136_P003 | Maize | plasma membrane | 66.87 | 66.46 |
| KXG24064 | Sorghum | cytosol | 66.56 | 66.15 |
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 66.56 | 66.15 |
| GSMUA_Achr9P25760_001 | Banana | cytosol | 66.25 | 66.05 |
| GSMUA_Achr4P21350_001 | Banana | cytosol | 66.25 | 65.85 |
| CDY68436 | Canola | cytosol | 65.02 | 65.22 |
| CDY29778 | Canola | cytosol, peroxisome, plastid | 60.99 | 65.02 |
| Solyc01g097950.2.1 | Tomato | cytosol | 65.02 | 65.02 |
| CDY42795 | Canola | cytosol | 64.71 | 64.91 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 39.32 | 64.8 |
| HORVU3Hr1G040910.1 | Barley | mitochondrion | 6.81 | 64.71 |
| CDY09039 | Canola | cytosol | 62.23 | 64.42 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 69.97 | 63.48 |
| Solyc01g097930.2.1 | Tomato | cytosol | 63.47 | 63.47 |
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 67.18 | 63.45 |
| CDY41915 | Canola | cytosol | 12.07 | 62.9 |
| Os12t0625000-01 | Rice | plasma membrane | 66.25 | 61.67 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 61.92 | 61.16 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 61.61 | 60.86 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 52.32 | 58.28 |
| KXG26295 | Sorghum | cytosol | 60.68 | 56.0 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 61.92 | 55.87 |
| Zm00001d003717_P001 | Maize | cytosol | 60.37 | 55.4 |
| CDY23400 | Canola | plastid | 66.56 | 55.27 |
| CDY30438 | Canola | plastid | 66.25 | 55.01 |
| CDY17914 | Canola | plastid | 66.56 | 54.85 |
| KRG92761 | Soybean | cytosol | 55.73 | 54.38 |
| CDX79804 | Canola | plastid | 66.56 | 54.29 |
| HORVU5Hr1G015070.1 | Barley | extracellular | 10.84 | 51.47 |
| CDY45790 | Canola | plastid | 67.49 | 51.05 |
| CDX89032 | Canola | plastid | 67.49 | 50.82 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 68.73 | 50.57 |
| TraesCS5A01G022200.1 | Wheat | plastid | 65.94 | 49.77 |
| TraesCS5B01G018700.3 | Wheat | plastid | 66.56 | 48.97 |
| HORVU5Hr1G005980.2 | Barley | plastid | 65.94 | 48.74 |
| CDY29946 | Canola | plastid | 56.97 | 46.94 |
| CDX89116 | Canola | mitochondrion | 52.94 | 46.47 |
| CDX71737 | Canola | mitochondrion | 52.94 | 46.47 |
| CDY21176 | Canola | plastid | 56.35 | 46.31 |
| CDY43932 | Canola | mitochondrion | 52.63 | 46.2 |
| CDY48919 | Canola | endoplasmic reticulum | 43.65 | 44.76 |
| HORVU5Hr1G082120.2 | Barley | mitochondrion, plastid | 25.39 | 43.85 |
| CDY68838 | Canola | mitochondrion | 14.86 | 35.29 |
| HORVU1Hr1G031220.3 | Barley | plastid | 37.15 | 29.48 |
| CDY53756 | Canola | endoplasmic reticulum | 33.44 | 24.66 |
| CDY52906 | Canola | plastid | 32.82 | 24.54 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | Gene3D:3.40.50.1100 | MapMan:50.2.5 | GO:A0A078G4T2 | UniProt:A0A078G4T2 |
| EnsemblPlants:CDY19703 | ProteinID:CDY19703 | ProteinID:CDY19703.1 | InterPro:CysK | InterPro:Cys_synth | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004124 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016829 | GO:GO:0019344 | EnsemblPlantsGene:GSBRNA2T00009435001 |
| InterPro:P-phosphate_BS | PFAM:PF00291 | InterPro:PLP-dep | ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF97 |
| MetaCyc:PWY-6936 | SUPFAM:SSF53686 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 | InterPro:Trypto_synt_PLP_dependent | UniPathway:UPA00136 |
| UniParc:UPI0004EDCF9C | SEG:seg | : | : | : | : |
Description
BnaA09g03560DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078G4T2]
Coordinates
chrLK032100:+:7432..9930
Molecular Weight (calculated)
34349.1 Da
IEP (calculated)
5.004
GRAVY (calculated)
0.102
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGCMIKKD VTELIGYTPM VYLNRIVDGC VARIAAKLEM MQPCSSVKDR IAYSMIKDAE DKGLIKPGES TLIEPTAGNT GIGLACIGAA RGYKVTLLMP
101: STMSLERRII LKALGAELHL TDMSIGIKGL LEKTEEMLNK TPGGFVPQQF ENLANPEIHY QTTGPEIWRD SAGKVDIFIA GVGTGGTVTG VGRFLKEMNK
201: DIKVIAVEPT ESPVLSGGEP GRHLIQGIGA GIIPANLDLS IVDEIIQVTG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIAVLFPSG
301: GERYLSTKLF DSVRFEAENL PVE
101: STMSLERRII LKALGAELHL TDMSIGIKGL LEKTEEMLNK TPGGFVPQQF ENLANPEIHY QTTGPEIWRD SAGKVDIFIA GVGTGGTVTG VGRFLKEMNK
201: DIKVIAVEPT ESPVLSGGEP GRHLIQGIGA GIIPANLDLS IVDEIIQVTG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIAVLFPSG
301: GERYLSTKLF DSVRFEAENL PVE
001: MEDRCLIKND ITELIGNTPM VYLNNVVDGC VARIAAKLEM MEPCSSVKDR IAYSMIKDAE DKGLITPGKS TLIEPTAGNT GIGLACMGAA RGYKVILVMP
101: STMSLERRII LRALGAELHL SDQRIGLKGM LEKTEAILSK TPGGYIPQQF ENPANPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTATG VGKFLKEQNK
201: DIKVCVVEPV ESPVLSGGQP GPHLIQGIGS GIVPFNLDLT IVDEIIQVAG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIVVVFPSG
301: GERYLSTKLF DSIRYEAENL PIE
101: STMSLERRII LRALGAELHL SDQRIGLKGM LEKTEAILSK TPGGYIPQQF ENPANPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTATG VGKFLKEQNK
201: DIKVCVVEPV ESPVLSGGQP GPHLIQGIGS GIVPFNLDLT IVDEIIQVAG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIVVVFPSG
301: GERYLSTKLF DSIRYEAENL PIE
Arabidopsis Description
CYSD2Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXS7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.