Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS6A01G373800.1
TraesCS6B01G411500.1
TraesCS6D01G358000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G28020.1 TraesCS6A01G373800.1 AT5G54390.1 21798944
AT5G28020.1 TraesCS6B01G411500.1 AT5G54390.1 21798944
AT5G28020.1 TraesCS6D01G358000.1 AT5G54390.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G300600.1 Wheat cytosol 98.17 98.17
HORVU2Hr1G074630.2 Barley cytosol 82.26 92.76
TraesCS2D01G298600.2 Wheat cytosol 98.17 89.66
KRH77854 Soybean cytosol 17.74 78.38
GSMUA_Achr3P30900_001 Banana cytosol, unclear 77.37 77.85
KXG26295 Sorghum cytosol 80.73 75.43
KRG96937 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 74.31 74.77
KRH68699 Soybean cytosol 74.01 74.46
Zm00001d003717_P001 Maize cytosol 79.82 74.15
Solyc09g082060.2.1 Tomato cytosol, nucleus, plastid 73.09 73.54
KRH27640 Soybean cytosol 73.09 73.54
PGSC0003DMT400082113 Potato cytosol 72.78 73.23
KRG91325 Soybean cytosol, mitochondrion, nucleus 71.56 72.0
AT4G14880.5 Thale cress cytosol 69.11 70.19
Bra039708.1-P Field mustard cytosol 69.11 70.19
CDY68436 Canola cytosol 69.11 70.19
VIT_14s0030g01520.t01 Wine grape cytosol 68.81 69.66
AT3G22460.1 Thale cress cytosol 53.21 69.6
CDY42795 Canola cytosol 68.5 69.57
CDY29778 Canola cytosol, peroxisome, plastid 64.22 69.31
KRH35519 Soybean cytosol 64.53 69.18
Bra036910.1-P Field mustard plastid 67.28 68.97
CDY09039 Canola cytosol 64.53 67.63
KRH13764 Soybean cytosol 65.14 66.36
KRH34037 Soybean cytosol 65.44 66.25
VIT_14s0030g01550.t01 Wine grape cytosol 68.81 65.79
KRG92757 Soybean cytosol 64.22 65.02
KRH34052 Soybean cytosol 64.22 64.81
CDY50768 Canola cytosol 63.0 64.17
CDY52498 Canola cytosol 63.3 64.09
CDY05586 Canola cytosol 63.3 64.09
Solyc01g097950.2.1 Tomato cytosol 63.3 64.09
AT5G28030.2 Thale cress cytosol 63.3 64.09
KRH43690 Soybean cytosol 45.57 63.95
CDY69239 Canola cytosol 62.69 63.86
CDY41911 Canola cytosol 62.69 63.86
AT5G28020.1 Thale cress cytosol 63.0 63.78
CDY41913 Canola cytosol 59.02 63.49
Solyc01g097940.1.1 Tomato plasma membrane 37.92 63.27
Bra036115.1-P Field mustard cytosol 62.39 63.16
CDX74160 Canola cytosol 61.77 62.93
CDX86187 Canola cytosol 58.41 62.83
CDX80680 Canola cytosol 58.41 62.83
Bra009985.1-P Field mustard cytosol 53.21 62.82
AT3G04940.1 Thale cress cytosol 62.08 62.65
CDY00007 Canola cytosol 61.77 62.54
CDY19703 Canola cytosol 61.16 61.92
Solyc01g097930.2.1 Tomato cytosol 60.86 61.61
Solyc01g097920.2.1 Tomato cytosol, plastid 65.75 60.39
CDY00008 Canola mitochondrion 62.69 58.4
CDY19702 Canola mitochondrion 62.39 58.12
Bra036114.1-P Field mustard cytosol 59.63 57.02
VIT_14s0030g01540.t01 Wine grape cytosol, mitochondrion, plastid 67.89 56.92
TraesCS3B01G102500.1 Wheat golgi, plastid 67.89 56.63
TraesCS5B01G018700.3 Wheat plastid 74.01 55.13
KRG92761 Soybean cytosol 55.35 54.68
TraesCS5B01G300800.1 Wheat mitochondrion 61.77 53.44
Bra001131.1-P Field mustard mitochondrion 62.39 51.0
TraesCS3B01G370200.3 Wheat plastid 58.72 50.93
VIT_14s0030g01490.t01 Wine grape cytosol 68.2 50.8
TraesCS6B01G217200.2 Wheat cytosol 49.54 47.51
Bra020605.1-P Field mustard mitochondrion 62.69 47.23
CDY41915 Canola cytosol 8.26 43.55
Bra040417.1-P Field mustard cytosol 40.37 42.31
VIT_14s0030g01560.t01 Wine grape endoplasmic reticulum, extracellular 74.62 34.81
TraesCS4B01G245100.1 Wheat plastid 35.17 26.08
Protein Annotations
KEGG:00270+2.5.1.47KEGG:00920+2.5.1.47Gene3D:3.40.50.1100MapMan:50.2.5InterPro:CysKInterPro:Cys_synth
GO:GO:0003674GO:GO:0003824GO:GO:0004124GO:GO:0006535GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016740InterPro:P-phosphate_BSPFAM:PF00291InterPro:PLP-dep
ScanProsite:PS00901PANTHER:PTHR10314PANTHER:PTHR10314:SF157SUPFAM:SSF53686TIGRFAMs:TIGR01136TIGRFAMs:TIGR01139
EnsemblPlantsGene:TraesCS2B01G316800EnsemblPlants:TraesCS2B01G316800.1InterPro:Trypto_synt_PLP_dependentTIGR:cd01561SEG:seg:
Description
No Description!
Coordinates
chr2B:-:452186408..452188719
Molecular Weight (calculated)
34596.0 Da
IEP (calculated)
5.280
GRAVY (calculated)
0.105
Length
327 amino acids
Sequence
(BLAST)
001: MGQWCPSETI AKDVTELIGR TPLVYLNKVV TGCEARVAAK LEIMGPCSSI KDRIGYSMIA DAEEKGLITP GKSVLIEPTG GNTGIGLAFM AAAKGYKLIV
101: TMPSSVSTER RTVLKAFGAE VVLTDPLRAM DDVVRRAEEI AAKTPNSYVL QQFENPANTK VHYETTGPEI WSGTAGAVDI LVAGIGTGGT ITGAGKYLKE
201: MNPEIQIYGV EPSECAVLSG GKPGPHKIQG LGAGFVPGVL DVSILDEVFQ ITNEEAASMA RQIALKEGLL VGMSSGATAA AAIRVARRVE NRGKLIVVVF
301: ASCGERYLSS FLFESIKKEA ENMVLEP
Best Arabidopsis Sequence Match ( AT4G14880.1 )
(BLAST)
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.