CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77854	Soybean	cytosol	21.64	89.19
KRG91325	Soybean	cytosol, mitochondrion, nucleus	91.48	85.85
KRH27640	Soybean	cytosol	83.61	78.46
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.66	75.69
KRH68699	Soybean	cytosol	79.67	74.77
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	78.69	73.85
HORVU3Hr1G040910.1	Barley	mitochondrion	8.2	73.53
GSMUA_Achr9P25760_001	Banana	cytosol	78.03	73.46
PGSC0003DMT400082113	Potato	cytosol	78.03	73.23
GSMUA_Achr11P...	Banana	cytosol	76.39	71.91
GSMUA_Achr4P21350_001	Banana	cytosol	76.39	71.69
Bra039708.1-P	Field mustard	cytosol	74.43	70.5
CDY68436	Canola	cytosol	74.43	70.5
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	74.75	70.15
KXG24064	Sorghum	cytosol	74.75	70.15
CDY42795	Canola	cytosol	73.77	69.88
AT4G14880.5	Thale cress	cytosol	73.77	69.88
Zm00001d031136_P003	Maize	plasma membrane	74.43	69.85
Bra036910.1-P	Field mustard	plastid	72.79	69.59
CDY29778	Canola	cytosol, peroxisome, plastid	68.85	69.31
TraesCS5D01G027600.1	Wheat	cytosol, golgi	73.77	69.23
AT3G22460.1	Thale cress	cytosol	56.07	68.4
CDY09039	Canola	cytosol	69.51	67.95
KRH13764	Soybean	cytosol	71.15	67.6
KRG92757	Soybean	cytosol	68.85	65.02
Os12t0625000-01	Rice	plasma membrane	73.77	64.84
TraesCS2B01G316800.1	Wheat	cytosol	69.18	64.53
KRH34037	Soybean	cytosol	68.2	64.4
TraesCS2A01G300600.1	Wheat	cytosol	68.2	63.61
KRH34052	Soybean	cytosol	67.21	63.27
HORVU2Hr1G074630.2	Barley	cytosol	59.02	62.07
KRH43690	Soybean	cytosol	46.56	60.94
TraesCS2D01G298600.2	Wheat	cytosol	70.49	60.06
KXG26295	Sorghum	cytosol	68.2	59.43
Zm00001d003717_P001	Maize	cytosol	68.52	59.38
KRH74905	Soybean	cytosol	15.41	58.75
KRH50190	Soybean	nucleus, plastid	67.87	53.21
TraesCS5A01G022200.1	Wheat	plastid	73.44	52.34
KRH71273	Soybean	nucleus, plastid	66.89	51.78
HORVU5Hr1G005980.2	Barley	plastid	74.1	51.72
TraesCS5B01G018700.3	Wheat	plastid	74.1	51.48
KRG92761	Soybean	cytosol	55.41	51.06
KRH00797	Soybean	mitochondrion	58.36	47.85
KRH40428	Soybean	mitochondrion	58.36	47.72
KRH64961	Soybean	nucleus, plastid	57.7	47.06
KRG94935	Soybean	nucleus	57.05	46.9
HORVU5Hr1G015070.1	Barley	extracellular	10.16	45.59
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	27.21	44.38
HORVU1Hr1G031220.3	Barley	plastid	38.69	28.99
KRH14231	Soybean	mitochondrion	35.08	25.18
KRH73904	Soybean	cytosol	28.85	20.85

Protein Annotations

Gene3D:3.40.50.1100	MapMan:50.2.5	EMBL:ACUP02006684	EnsemblPlantsGene:GLYMA_10G247900	GO:GO:0003674	GO:GO:0003824
GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	UniProt:I1LE45	EnsemblPlants:KRH35519	ProteinID:KRH35519	ProteinID:KRH35519.1	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF101	SUPFAM:SSF53686
InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002969199	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:47623981..47628091

Molecular Weight (calculated)

31946.8 Da

IEP (calculated)

5.499

GRAVY (calculated)

0.170

Length

305 amino acids

Sequence
(BLAST)

001: MAVEKSGIAK DGTELIGKTP LVYLNKIADG SAARVAAKLE LMEPCSSVKD RIAYSMIADA EEKGLITPGQ SILIEPTSGN NGIGLAILAA AKGYKLIITM
101: PASMSLERRT ILLSFGAELI RLPTAAYFSN LKNPANPKVH YETTGPEIWE GTGGKVDALV SGIGTGGTIT GVGKFLKEKN PNIKLYSVEP VESPVLSGGK
201: PGPHKIQGIG AGFVPGVLEV SLVDEVVQIS SDEAIETAKL LALKEGLFVG ISSGAAASAA IKIAKRSENA GKLIVVIFPS FGEWYLSSVL FESIRQEAES
301: LTFES

Best Arabidopsis Sequence Match ( AT4G14880.1 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.